RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ALG1LQ6GMV1 187 aa12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 WASH2PQ6VEQ5 465 aa12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 MRGPREQ86SM8 312 aa12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 LRRTM4Q86VH4 590 aa12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 ZNF547Q8IVP9 402 aa12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 NSMCE1Q8WV22 266 aa12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 CPT1BQ92523 772 aa12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 POM121Q96HA1 1249 aa12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 POLR1EQ9GZS1 481 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 ZBTB20Q9HC78 741 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 TRIM39Q9HCM9 518 aa12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 SEPT11Q9NVA2 429 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 WDR37Q9Y2I8 494 aa12.57□□□□□ -0.4
CHRNA1-203ENST00000409219 KMOO15229 486 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 PRPSAP2O60256 369 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 SLC25A14O95258 325 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 ALPPP05187 535 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 FECHP22830 423 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 AMPD1P23109 780 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 MIPP30301 263 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 DSC2Q02487 901 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 CAMK4Q16566 473 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 TMCO3Q6UWJ1 677 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 FJX1Q86VR8 437 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 RAB43Q86YS6 212 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 SYTL1Q8IYJ3 562 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 MCOLN2Q8IZK6 566 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 GALNT16Q8N428 558 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 TTC30BQ8N4P2 665 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 TEX26Q8N6G2 289 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 LPCAT1Q8NF37 534 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 OR8K5Q8NH50 307 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 CD180Q99467 661 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 ZWILCHQ9H900 591 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 PCMTD2Q9NV79 361 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 TRIM10Q9UDY6 481 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 CSAG2Q9Y5P2 127 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 NUP210LQ5VU65 1888 aa12.56□□□□□ -0.4
CHRNA1-203ENST00000409219 NAV3Q8IVL0 2385 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 UBA6A0AVT1 1052 aaPredicted RBP12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 ESPNB1AK53 854 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 MTX2O75431 263 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 IDSP22304 550 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 PTGER4P35408 488 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 ITKQ08881 620 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 NCF4Q15080 339 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 KHDC1Q4VXA5 237 aaKnown RBP12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 ANKRD20A8PQ5CZ79 823 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 SPOCD1Q6ZMY3 1216 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 C11orf96Q7Z7L8 435 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 PSTKQ8IV42 348 aaKnown RBP12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 GLYATL1Q969I3 302 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 EID2BQ96D98 161 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 CLIP3Q96DZ5 547 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 SPATA16Q9BXB7 569 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 TLR10Q9BXR5 811 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 TRIM7Q9C029 511 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 COPG2Q9UBF2 871 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 BTRCQ9Y297 605 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 CCDC88CQ9P219 2028 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 MYO7BQ6PIF6 2116 aa12.55□□□□□ -0.4
CHRNA1-203ENST00000409219 RGSL1A5PLK6 1076 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 OR5K3A6NET4 321 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 H3BRJ5 948 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 MASP2O00187 686 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 DDX3YO15523 660 aaKnown RBP12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 LCA5LO95447 670 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 ZBTB11O95625 1053 aaPredicted RBP12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 STSP08842 583 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 OTX2P32243 289 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 MAMLD1Q13495 774 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 PLCL1Q15111 1095 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 SYCP1Q15431 976 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 TESK1Q15569 626 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 DPYSL2Q16555 572 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 PTCHD3Q3KNS1 767 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 ZNF789Q5FWF6 425 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 DCAF10Q5QP82 559 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 ALS2CLQ60I27 953 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 KLHL35Q6PF15 583 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 ZADH2Q8N4Q0 377 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 MLKLQ8NB16 471 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 CLEC1AQ8NC01 280 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 GPR26Q8NDV2 337 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 CCHCR1Q8TD31 782 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 GRHL3Q8TE85 626 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 TM9SF4Q92544 642 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 PPM1MQ96MI6 270 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 CSPG4P5Q96PW8 444 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 PCDH9Q9HC56 1237 aa12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 NOVA2Q9UNW9 492 aaKnown RBP12.54□□□□□ -0.4
CHRNA1-203ENST00000409219 IPO13O94829 963 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 EDN3P14138 238 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 ARL4AP40617 200 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 HALP42357 657 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 DCDC1P59894 354 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 RPL26P61254 145 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 ART3Q13508 389 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms