RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SHC4Q6S5L8 630 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 SLC36A4Q6YBV0 504 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 CCDC91Q7Z6B0 441 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 CENPVQ7Z7K6 275 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 TMCO5AQ8N6Q1 288 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 EMC1Q8N766 993 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 RBM15BQ8NDT2 890 aaKnown RBP4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 Q8NFD4 153 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 EXD1Q8NHP7 514 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 GDAP1Q8TB36 358 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 PPP4R1Q8TF05 950 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 ERO1AQ96HE7 468 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 SEMA3CQ99985 751 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 GPR88Q9GZN0 384 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 C2orf40Q9H1Z8 148 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 WDR26Q9H7D7 661 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 OLAHQ9NV23 265 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 TRNAU1APQ9NX07 287 aaKnown RBP4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 GAGE2DQ9UEU5 116 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 SLC24A2Q9UI40 661 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 ING1Q9UK53 422 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 ATP7AQ04656 1500 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 VWDEQ8N2E2 1590 aa4.7□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZNF518AQ6AHZ1 1483 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 LRPPRCP42704 1394 aaKnown RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 PARD3Q8TEW0 1356 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 TRPM2O94759 1503 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 PRDM15P57071 1507 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 TRAV34A0A0B4J273 112 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 IGHV4-28A0A0C4DH34 117 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 IGLV5-39A0A0G2JS06 123 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 DIAPH2O60879 1101 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 RBMXL2O75526 392 aaKnown RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 GAGE7O76087 117 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZWINTO95229 277 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 GAGE12FP0CL80 117 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 GAGE12GP0CL81 117 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 GAGE12IP0CL82 117 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 OAS2P29728 719 aaKnown RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 HOXC8P31273 242 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 HSPA4P34932 840 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 NPY4RP50391 375 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 PLCD1P51178 756 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 CLCNKAP51800 687 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 CAPZA1P52907 286 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 HNRNPH2P55795 449 aaKnown RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 SNRPEP62304 92 aaKnown RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 GAGE1Q13065 139 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 GAGE4Q13068 117 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 RBMS2Q15434 407 aaKnown RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 EFHC1Q5JVL4 640 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 NSUN5P2Q63ZY6 315 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 LCN10Q6JVE6 187 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 SLC2A7Q6PXP3 512 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 Q6ZSV7 163 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 Q6ZTK2 550 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 MSANTD1Q6ZTZ1 278 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZNF367Q7RTV3 350 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 GPR180Q86V85 440 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 TMEM173Q86WV6 379 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 FBXO39Q8N4B4 442 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 TMEM199Q8N511 208 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 GCSAMQ8N6F7 178 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 PAPD5Q8NDF8 572 aaKnown RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 THAP6Q8TBB0 222 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 WFIKKN2Q8TEU8 576 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 INPP5DQ92835 1189 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 SEPHS2Q99611 448 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 SLX1AQ9BQ83 275 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 HEY2Q9UBP5 337 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 FBXL2Q9UKC9 423 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 FZD10Q9ULW2 581 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 POMT1Q9Y6A1 747 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 SMG6Q86US8 1419 aaKnown RBP4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 MLH3Q9UHC1 1453 aa4.69□□□□□ -1.66
HMGB3P18-201ENST00000406327 RPS10-NUDT3A0A1W2PQS6 291 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 H0YGN5 161 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 TIMM23O14925 209 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 SPRY3O43610 288 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 C22orf31O95567 290 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 CH25HO95992 272 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 SLPIP03973 132 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 CELA2AP08217 269 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 TMEM191BP0C7N4 346 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 UGT1A1P22309 533 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 MTHFRP42898 656 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 BMXP51813 675 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 CTSCP53634 463 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 TAS2R38P59533 333 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 PPP2R2BQ00005 443 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 CDK3Q00526 305 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 ROR2Q01974 943 aaKnown RBP4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 CDC37Q16543 378 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 SRSF7Q16629 238 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 SYT16Q17RD7 645 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 AMZ1Q400G9 498 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 C6orf163Q5TEZ5 329 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 TYW3Q6IPR3 259 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms