RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 MPP7Q5T2T1 576 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 RTL10Q7L3V2 364 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 PBX4Q9BYU1 374 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 NMUR2Q9GZQ4 415 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 TRIT1Q9H3H1 467 aaKnown RBP8.98□□□□□ -0.97
LIG4-202ENST00000405925 SGK2Q9HBY8 427 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 CCDC177Q9NQR7 707 aaPredicted RBP8.98□□□□□ -0.97
LIG4-202ENST00000405925 SAR1AQ9NR31 198 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 MARCH4Q9P2E8 410 aaPredicted RBP8.98□□□□□ -0.97
LIG4-202ENST00000405925 PRKAB1Q9Y478 270 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 CFAP20Q9Y6A4 193 aaKnown RBP8.98□□□□□ -0.97
LIG4-202ENST00000405925 TRIP12Q14669 1992 aaPredicted RBP8.98□□□□□ -0.97
LIG4-202ENST00000405925 WASH4PA8MWX3 477 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 SNUPNO95149 360 aaKnown RBP8.98□□□□□ -0.97
LIG4-202ENST00000405925 C8GP07360 202 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 CAPN1P07384 714 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 TNNI3P19429 210 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 HLA-FP30511 346 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 HPCAL1P37235 193 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 PGGT1BP53609 377 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 SKP1P63208 163 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 NFATC2Q13469 925 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 FAM78AQ5JUQ0 283 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 RNF43Q68DV7 783 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 NCEH1Q6PIU2 408 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 TSPAN33Q86UF1 283 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 GALNT4Q8N4A0 578 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 TRIML2Q8N7C3 387 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 PNPLA1Q8N8W4 532 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 TNIP2Q8NFZ5 429 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 LCN9Q8WX39 176 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 COL26A1Q96A83 441 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 C7orf26Q96N11 449 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 BTBD10Q9BSF8 475 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 TMEM98Q9Y2Y6 226 aa8.98□□□□□ -0.97
LIG4-202ENST00000405925 DOCK5Q9H7D0 1870 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 A0A088AWK7 358 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 A0A0U1RQS6 177 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 KANSL1LA0AUZ9 987 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 H0YGN5 161 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 OR1I1O60431 355 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 CHRNGP07510 517 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 CHRM1P11229 460 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 ZNF10P21506 573 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 PSMA4P25789 261 aaKnown RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 RPL10P27635 214 aaKnown RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 ANXA11P50995 505 aaKnown RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 CLCNKAP51800 687 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 SLC25A3Q00325 362 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 PON2Q15165 354 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 SULT1C3Q6IMI6 304 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 CYB5D1Q6P9G0 228 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 ARMCX6Q7L4S7 300 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 LRRTM4Q86VH4 590 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 TDHQ8IZJ6 230 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 C2CD4AQ8NCU7 369 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 CLHC1Q8NHS4 586 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 TWIST2Q8WVJ9 160 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 C19orf60Q96EN9 201 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 OTUB1Q96FW1 271 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 TBCDQ9BTW9 1192 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 CEP44Q9C0F1 390 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 TFB2MQ9H5Q4 396 aaKnown RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 ZNF490Q9ULM2 529 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 CA14Q9ULX7 337 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 DTNAQ9Y4J8 743 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 NFS1Q9Y697 457 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 STON1Q9Y6Q2 735 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 COL11A1P12107 1806 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 PRR5-ARHGAP8B1AHC4 643 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 H3BNC9 293 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 SLC28A1O00337 649 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 DYRK3O43781 588 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 ZNF682O95780 498 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 CYP17A1P05093 508 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 SNRPB2P08579 225 aaKnown RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 NTSR1P30989 418 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 RGRP47804 291 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 ARHGAP8P85298 464 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 CREB5Q02930 508 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 CHRNB3Q05901 458 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 GTF2H2Q13888 395 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 SQLEQ14534 574 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 MAPKAPK3Q16644 382 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 AP5B1Q2VPB7 878 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 TIGD2Q4W5G0 525 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 LRRC23Q53EV4 343 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 GTF2H2CQ6P1K8 395 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 SLC30A9Q6PML9 568 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 CENPLQ8N0S6 344 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 EEF1AKMT1Q8WVE0 214 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 MRPL38Q96DV4 380 aaKnown RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 AIF1LQ9BQI0 150 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 MRM3Q9HC36 420 aaKnown RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 SORCS3Q9UPU3 1222 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 ENTPD4Q9Y227 616 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 KCNK6Q9Y257 313 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 EIF4E1BA6NMX2 242 aaKnown RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 PLK4O00444 970 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 TRIM24O15164 1050 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms