RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 QSOX1O00391 747 aa28.88■■■□□ 2.21
USP42-202ENST00000404008 YY2O15391 372 aa28.88■■■□□ 2.21
USP42-202ENST00000404008 POP7O75817 140 aaKnown RBP28.88■■■□□ 2.21
USP42-202ENST00000404008 RPS3P23396 243 aaKnown RBP eCLIP28.88■■■□□ 2.21
USP42-202ENST00000404008 ADARP55265 1226 aaKnown RBP28.88■■■□□ 2.21
USP42-202ENST00000404008 KIAA0408Q6ZU52 694 aa28.88■■■□□ 2.21
USP42-202ENST00000404008 TAF8Q7Z7C8 310 aa28.88■■■□□ 2.21
USP42-202ENST00000404008 VPS37BQ9H9H4 285 aa28.88■■■□□ 2.21
USP42-202ENST00000404008 ZFATQ9P243 1243 aa28.88■■■□□ 2.21
USP42-202ENST00000404008 PRR19A6NJB7 356 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 FFAR2O15552 330 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 OR56A5P0C7T3 313 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 LEPRP48357 1165 aaKnown RBP28.87■■■□□ 2.21
USP42-202ENST00000404008 UBAP2Q5T6F2 1119 aaKnown RBP28.87■■■□□ 2.21
USP42-202ENST00000404008 SLC30A9Q6PML9 568 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 GALNT7Q86SF2 657 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 AMZ2Q86W34 360 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 BIRC8Q96P09 236 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 KLC4Q9NSK0 619 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 NLGN3Q9NZ94 848 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 GNPTGQ9UJJ9 305 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 KCNK6Q9Y257 313 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 CRYL1Q9Y2S2 319 aa28.87■■■□□ 2.21
USP42-202ENST00000404008 TPP1O14773 563 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 FLRT2O43155 660 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 C1QAP02745 245 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 ANXA6P08133 673 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 STX2P32856 288 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 ACTR1BP42025 376 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 EIF3BP55884 814 aaKnown RBP28.86■■■□□ 2.21
USP42-202ENST00000404008 ACTR1AP61163 376 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 DEFB133Q30KQ1 61 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 LVRNQ6Q4G3 990 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 ALYREFQ86V81 257 aaKnown RBP28.86■■■□□ 2.21
USP42-202ENST00000404008 OR2L2Q8NH16 312 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 NETO1Q8TDF5 533 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 TXLNGYQ9BZA5 131 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 SMYD2Q9NRG4 433 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 GULP1Q9UBP9 304 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 DOLKQ9UPQ8 538 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 BTBD3Q9Y2F9 522 aa28.86■■■□□ 2.21
USP42-202ENST00000404008 COL5A1P20908 1838 aaPredicted RBP28.85■■■□□ 2.21
USP42-202ENST00000404008 KLHL33A6NCF5 533 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 KCNJ13O60928 360 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 HAUS5O94927 633 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 VCLP18206 1134 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 PBLDP30039 288 aaPredicted RBP28.85■■■□□ 2.21
USP42-202ENST00000404008 GRK6P43250 576 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 CLCNKAP51800 687 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 ARHGAP8P85298 464 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 DMPKQ09013 629 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 CTSL3PQ5NE16 218 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 OR4C6Q8NH72 309 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 FBF1Q8TES7 1133 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 CCM2Q9BSQ5 444 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 TAAR2Q9P1P5 351 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 DNAJC16Q9Y2G8 782 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 PCDHB1Q9Y5F3 818 aa28.85■■■□□ 2.21
USP42-202ENST00000404008 ARID1BQ8NFD5 2236 aaPredicted RBP28.84■■■□□ 2.21
USP42-202ENST00000404008 MGAT4DA6NG13 374 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 FAM159BA6NKW6 160 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 F8W8V4 182 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 FTH1P02794 183 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 ESR1P03372 595 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 GABRB3P28472 473 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 FMO4P31512 558 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 PHBP35232 272 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 INAVAQ3KP66 663 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 ZNF658BQ4V348 819 aaPredicted RBP28.84■■■□□ 2.21
USP42-202ENST00000404008 PTRHD1Q6GMV3 140 aaKnown RBP28.84■■■□□ 2.21
USP42-202ENST00000404008 SLC26A11Q86WA9 606 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 EID2Q8N6I1 236 aa28.84■■■□□ 2.21
USP42-202ENST00000404008 SPATS2LQ9NUQ6 558 aaKnown RBP28.84■■■□□ 2.21
USP42-202ENST00000404008 ARHGEF17Q96PE2 2063 aaPredicted RBP28.84■■■□□ 2.21
USP42-202ENST00000404008 C17orf113A0A1B0GUU1 675 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 CXorf49A8MYA2 514 aaPredicted RBP28.83■■■□□ 2.21
USP42-202ENST00000404008 TRIM38O00635 465 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 PIAS1O75925 651 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 ACSL3O95573 720 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 AHSGP02765 367 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 GSTM1P09488 218 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 ALPPL2P10696 532 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 MCM3P25205 808 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 GSTM4Q03013 218 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 NAA30Q147X3 362 aaPredicted RBP28.83■■■□□ 2.21
USP42-202ENST00000404008 CNSTQ6PJW8 725 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 XKR5Q6UX68 686 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 FAM83HQ6ZRV2 1179 aaPredicted RBP28.83■■■□□ 2.21
USP42-202ENST00000404008 TRMT10CQ7L0Y3 403 aaKnown RBP28.83■■■□□ 2.21
USP42-202ENST00000404008 NAXDQ8IW45 347 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 FAM46DQ8NEK8 389 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 CDKL2Q92772 493 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 DUSP23Q9BVJ7 150 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 FUT8Q9BYC5 575 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 PARD6BQ9BYG5 372 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 OSGEPL1Q9H4B0 414 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 NSMCE4AQ9NXX6 385 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 PSAT1Q9Y617 370 aa28.83■■■□□ 2.21
USP42-202ENST00000404008 PMS2P54278 862 aa28.82■■■□□ 2.2
USP42-202ENST00000404008 NFE2L1Q14494 772 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms