RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ROR1Q01973 937 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 RELQ04864 619 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 PRKAA1Q13131 559 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 CALCRLQ16602 461 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 CRY2Q49AN0 593 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 KLHL26Q53HC5 615 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 TCP11X2Q5H9J9 407 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 AWAT2Q6E213 333 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 KRT80Q6KB66 452 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 RBPMS2Q6ZRY4 209 aaKnown RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 GALNTL5Q7Z4T8 443 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 CENPVQ7Z7K6 275 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 TMEM173Q86WV6 379 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 TMEM219Q86XT9 240 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 FAM114A1Q8IWE2 563 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 C1orf87Q8N0U7 546 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 GBGT1Q8N5D6 347 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 C1orf52Q8N6N3 182 aaKnown RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 PI4KAP1Q8N8J0 262 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 XXYLT1Q8NBI6 393 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 OR10S1Q8NGN2 331 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 B4GALNT2Q8NHY0 566 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 FAM216AQ8WUB2 273 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 SEMA4DQ92854 862 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 PIGTQ969N2 578 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 TMEM19Q96HH6 336 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 DACH2Q96NX9 599 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 ABHD6Q9BV23 337 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 FNDC11Q9BVV2 318 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 IL25Q9H293 177 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 LRMDAQ9H2I8 198 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 CHCHD3Q9NX63 227 aaKnown RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 SELENONQ9NZV5 590 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 RCC2Q9P258 522 aaKnown RBP3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 SIX4Q9UIU6 781 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 ANAPC5Q9UJX4 755 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 NFS1Q9Y697 457 aa3.78□□□□□ -1.8
HMGB1P17-201ENST00000403495 TCRBV21S2A2A0A5A6 115 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 OR2M5A3KFT3 312 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNF587BE7ETH6 402 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 GCNT3O95395 438 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 PMS2P2O95744 297 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 GLUD1P00367 558 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 HLA-DOBP13765 273 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 PLA2G2AP14555 144 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 PFKFB1P16118 471 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 GLUD2P49448 558 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 HTR6P50406 440 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 DSC1Q08554 894 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 PLA2G7Q13093 441 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 COG2Q14746 738 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 TNIP1Q15025 636 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 SF3B4Q15427 424 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 HLFQ16534 295 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 EFHC1Q5JVL4 640 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 STXBP5Q5T5C0 1151 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 RNASEH2BQ5TBB1 312 aaKnown RBP3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 TRAT1Q6PIZ9 186 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 GFRALQ6UXV0 394 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 Q75L30 129 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 MEPCEQ7L2J0 689 aaKnown RBP3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNF575Q86XF7 245 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 GCSAMQ8N6F7 178 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNF441Q8N8Z8 693 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 SMG7Q92540 1137 aaKnown RBP3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNF653Q96CK0 615 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 SPACA9Q96E40 222 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 OXNAD1Q96HP4 312 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNF558Q96NG5 402 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 OR6C1Q96RD1 312 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 DPAGT1Q9H3H5 408 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 ERVMER34-1Q9H9K5 563 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 PRMT7Q9NVM4 692 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNF224Q9NZL3 707 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 NPAP1Q9NZP6 1156 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 WNT16Q9UBV4 365 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 RNF150Q9ULK6 438 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 AMDHD2Q9Y303 409 aa3.77□□□□□ -1.81
HMGB1P17-201ENST00000403495 OR5K3A6NET4 321 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 TRIM77I1YAP6 450 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 MEIS2O14770 477 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 IPO8O15397 1037 aaKnown RBP3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 SSX4O60224 188 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 PRAMEF11O60813 436 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 LDB3O75112 727 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 BMP10O95393 424 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 IGKV2-30P06310 120 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 CCDC175P0C221 793 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 OR52Z1P0C646 297 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 POLR2CP19387 275 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 PRKCIP41743 596 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 PSMC4P43686 418 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 NPY4RP50391 375 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 TPD52P55327 224 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 DLG1Q12959 904 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 TWIST1Q15672 202 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 OR7E24Q6IFN5 339 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 CAVIN1Q6NZI2 390 aaKnown RBP3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 DCLRE1AQ6PJP8 1040 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 PPP1R21Q6ZMI0 780 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms