RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PRR23BQ6ZRT6 265 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 C16orf59Q7L2K0 433 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 TMCO2Q7Z6W1 182 aaPredicted RBP19.6■□□□□ 0.73
CCDC47-202ENST00000403162 SYVN1Q86TM6 617 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 TANKQ92844 425 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 ACDQ96AP0 544 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 SEPHS2Q99611 448 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 SEMA3CQ99985 751 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 POLR1EQ9GZS1 481 aaKnown RBP19.6■□□□□ 0.73
CCDC47-202ENST00000403162 TAS2R13Q9NYV9 303 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 SLAMF8Q9P0V8 285 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 SUN2Q9UH99 717 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 MAGEL2Q9UJ55 1249 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 IKZF3Q9UKT9 509 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 MED16Q9Y2X0 877 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 PCDHGA11Q9Y5H2 935 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 TULP3O75386 442 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 PRSS23O95084 383 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 YAP1P46937 504 aaKnown RBP19.6■□□□□ 0.73
CCDC47-202ENST00000403162 TUBA3CQ13748 450 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 TSNQ15631 228 aaKnown RBP19.6■□□□□ 0.73
CCDC47-202ENST00000403162 TXNDC11Q6PKC3 985 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 MON1AQ86VX9 555 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 HID1Q8IV36 788 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 SFRP1Q8N474 314 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 DPP10Q8N608 796 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 FUBP1Q96AE4 644 aaKnown RBP19.6■□□□□ 0.73
CCDC47-202ENST00000403162 MRPL9Q9BYD2 267 aaKnown RBP19.6■□□□□ 0.73
CCDC47-202ENST00000403162 INTS7Q9NVH2 962 aaKnown RBP19.6■□□□□ 0.73
CCDC47-202ENST00000403162 HCSTQ9UBK5 93 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 ZNF225Q9UK10 706 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 PCTPQ9UKL6 214 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 SCML2Q9UQR0 700 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 PCDHB3Q9Y5E6 796 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 LTBP2Q14767 1821 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 ZBBXA8MT70 800 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 F8W810 466 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 SEC14L2O76054 403 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 FGBP02675 491 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 MT-ND1P03886 318 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 CCNA2P20248 432 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 UGT1A1P22309 533 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 UGT1A4P22310 534 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 PRDX3P30048 256 aaKnown RBP19.59■□□□□ 0.73
CCDC47-202ENST00000403162 UGT1A3P35503 534 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 UGT1A5P35504 534 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 POLR2IP36954 125 aaKnown RBP19.59■□□□□ 0.73
CCDC47-202ENST00000403162 ALDH3A2P51648 485 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 TIGD2Q4W5G0 525 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 XKR5Q6UX68 686 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 DDHD1Q8NEL9 900 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 NSMCE2Q96MF7 247 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 RNF145Q96MT1 663 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 NTN4Q9HB63 628 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 USP22Q9UPT9 525 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 PRG3Q9Y2Y8 225 aaPredicted RBP19.59■□□□□ 0.73
CCDC47-202ENST00000403162 SOAT2O75908 522 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 ITGB1P05556 798 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 MATN1P21941 496 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 IL12AP29459 219 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 ARSFP54793 590 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 OR4D2P58180 307 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 BNIP3Q12983 259 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 SERINC3Q13530 473 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 SPIDRQ14159 915 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 PARP15Q460N3 678 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 CHST15Q7LFX5 561 aaPredicted RBP19.59■□□□□ 0.73
CCDC47-202ENST00000403162 ZFAND4Q86XD8 727 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 OR2T11Q8NH01 316 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 SUSD3Q96L08 255 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 MUS81Q96NY9 551 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 RIC8BQ9NVN3 520 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 SLC30A1Q9Y6M5 507 aa19.59■□□□□ 0.73
CCDC47-202ENST00000403162 UBA6A0AVT1 1052 aaPredicted RBP19.58■□□□□ 0.72
CCDC47-202ENST00000403162 UPK1AO00322 258 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 RAMP2O60895 175 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 GJB3O75712 270 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 TFPTP0C1Z6 253 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 TYMPP19971 482 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 CASP2P42575 452 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 GALNT3Q14435 633 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 POLD3Q15054 466 aaPredicted RBP19.58■□□□□ 0.72
CCDC47-202ENST00000403162 BROXQ5VW32 411 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 GLYATQ6IB77 296 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 DCDC5Q6ZRR9 648 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 PROKR1Q8TCW9 393 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 CDKN2AIPNLQ96HQ2 116 aa19.58■□□□□ 0.72
CCDC47-202ENST00000403162 CDC7O00311 574 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 DEAF1O75398 565 aaPredicted RBP19.57■□□□□ 0.72
CCDC47-202ENST00000403162 CES1P23141 567 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 DAG1Q14118 895 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 FBXO48Q5FWF7 155 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 NKAPQ8N5F7 415 aaKnown RBP19.57■□□□□ 0.72
CCDC47-202ENST00000403162 ATP6V0D2Q8N8Y2 350 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 OR56A4Q8NGH8 313 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 IGSF8Q969P0 613 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 FANCEQ9HB96 536 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 NLE1Q9NVX2 485 aaPredicted RBP19.57■□□□□ 0.72
CCDC47-202ENST00000403162 FAM50BQ9Y247 325 aa19.57■□□□□ 0.72
CCDC47-202ENST00000403162 DRGXA6NNA5 263 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms