RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 MAGEA3P43357 314 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 PRAMEP78395 509 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 NFE2L1Q14494 772 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 ITIH4Q14624 930 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 RTP5Q14D33 572 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 CLPPQ16740 277 aaPredicted RBP18.85■□□□□ 0.61
RTN4-207ENST00000402434 RNASEH2BQ5TBB1 312 aaKnown RBP18.85■□□□□ 0.61
RTN4-207ENST00000402434 LYPLAL1Q5VWZ2 237 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 PACS1Q6VY07 963 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 SYT10Q6XYQ8 523 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 FAM83HQ6ZRV2 1179 aaPredicted RBP18.85■□□□□ 0.61
RTN4-207ENST00000402434 SYDE1Q6ZW31 735 aaPredicted RBP18.85■□□□□ 0.61
RTN4-207ENST00000402434 KLHL7Q8IXQ5 586 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 PPIL6Q8IXY8 311 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 CLDN19Q8N6F1 224 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 KDF1Q8NAX2 398 aaPredicted RBP18.85■□□□□ 0.61
RTN4-207ENST00000402434 OR6P1Q8NGX9 317 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.85■□□□□ 0.616e-7■□□□□ 11.1
RTN4-207ENST00000402434 SH3KBP1Q96B97 665 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 SERPINB12Q96P63 405 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 DKK4Q9UBT3 224 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 SOX13Q9UN79 622 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 PCDHB1Q9Y5F3 818 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 ENTPD2Q9Y5L3 495 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 ASPMQ8IZT6 3477 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 PIKFYVEQ9Y2I7 2098 aa18.85■□□□□ 0.61
RTN4-207ENST00000402434 IGHV1OR21-1A0A087WYE8 117 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 C17orf113A0A1B0GUU1 675 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 TMEM8BA6NDV4 472 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 PDZK1P1A8MUH7 402 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 IVDP26440 423 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 NMBRP28336 390 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 CD1CP29017 333 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 SLC19A1P41440 591 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 DRG2P55039 364 aaKnown RBP18.84■□□□□ 0.61
RTN4-207ENST00000402434 ZNF658BQ4V348 819 aaPredicted RBP18.84■□□□□ 0.61
RTN4-207ENST00000402434 XKR5Q6UX68 686 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 MFSD3Q96ES6 412 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 STN1Q9H668 368 aaKnown RBP18.84■□□□□ 0.61
RTN4-207ENST00000402434 SYNDIG1Q9H7V2 258 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 UCK1Q9HA47 277 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 ASIC3Q9UHC3 531 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 WDR37Q9Y2I8 494 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 ACACAQ13085 2346 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 EPG5Q9HCE0 2579 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 APC2O95996 2303 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 MAGEB16A2A368 324 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 SDR42E2A6NKP2 422 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 AP2A2O94973 939 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 CPNE6O95741 557 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 GPLD1P80108 840 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 DR1Q01658 176 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 ZFP36L1Q07352 338 aaKnown RBP18.84■□□□□ 0.61
RTN4-207ENST00000402434 CLCA4Q14CN2 919 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 SEPT7Q16181 437 aaKnown RBP18.84■□□□□ 0.61
RTN4-207ENST00000402434 MPP5Q8N3R9 675 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 NXPE2Q96DL1 559 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 TTC1Q99614 292 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 SLC38A3Q99624 504 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.84■□□□□ 0.61
RTN4-207ENST00000402434 KCNK4Q9NYG8 393 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 ACSL5Q9ULC5 683 aa18.84■□□□□ 0.61
RTN4-207ENST00000402434 ATXN7L1Q9ULK2 861 aaPredicted RBP18.84■□□□□ 0.61
RTN4-207ENST00000402434 FREM2Q5SZK8 3169 aa18.83■□□□□ 0.61
RTN4-207ENST00000402434 TMX2-CTNND1H3BSU7 103 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 GOLGA8MH3BSY2 632 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 DNALI1O14645 258 aaPredicted RBP18.83■□□□□ 0.6
RTN4-207ENST00000402434 GSTM1P09488 218 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 ARNTP27540 789 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 PBLDP30039 288 aaPredicted RBP18.83■□□□□ 0.6
RTN4-207ENST00000402434 CCKBRP32239 447 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 EPHA4P54764 986 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 GSTM4Q03013 218 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 AMZ1Q400G9 498 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 FASTKD1Q53R41 847 aaKnown RBP18.83■□□□□ 0.6
RTN4-207ENST00000402434 TMPRSS9Q7Z410 1059 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 B3GNT8Q7Z7M8 397 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 PCGF5Q86SE9 256 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 PIM3Q86V86 326 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 HOOK3Q86VS8 718 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 JAMLQ86YT9 394 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 HM13Q8TCT9 377 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 ATXN7L3BQ96GX2 97 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 TMEM74Q96NL1 305 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 CCM2Q9BSQ5 444 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 RDH14Q9HBH5 336 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 SLC40A1Q9NP59 571 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 CATSPERZQ9NTU4 200 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 POT1Q9NUX5 634 aa18.83■□□□□ 0.6
RTN4-207ENST00000402434 KIF26BQ2KJY2 2108 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 FAM237BA0A1B0GVD1 139 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 LILRA5A6NI73 299 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 OR52A4PA6NMU1 304 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 QSOX1O00391 747 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 PPARGP37231 505 aaPredicted RBP18.82■□□□□ 0.6
RTN4-207ENST00000402434 HALP42357 657 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 CFHR1Q03591 330 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 SEMA3AQ14563 771 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 AARS2Q5JTZ9 985 aaKnown RBP18.82■□□□□ 0.6
RTN4-207ENST00000402434 CES3Q6UWW8 571 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms