RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 FXYD1O00168 92 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 PRRG1O14668 218 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 ZNF623O75123 536 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 ESRRBO95718 433 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 CYP11A1P05108 521 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 UROSP10746 265 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 ACADVLP49748 655 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 CCL23P55773 120 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 SIM2Q14190 667 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 FAM98BQ52LJ0 330 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 NHSL2Q5HYW2 709 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 TMEM173Q86WV6 379 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 CARM1Q86X55 608 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 SOCS4Q8WXH5 440 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 TMBIM1Q969X1 311 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 L3HYPDHQ96EM0 354 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 C1orf74Q96LT6 269 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 MRGBPQ9NV56 204 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 MTMR11A4FU01 709 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 BBIP1A8MTZ0 92 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 DEAF1O75398 565 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 FKBP9O95302 570 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 PAPSS2O95340 614 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 FAM163BP0C2L3 166 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 MYCLP1P12525 358 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 TYMPP19971 482 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 CTGFP29279 349 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 IL12AP29459 219 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 IL5RAQ01344 420 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 BOP1Q14137 746 aaKnown RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 CST9Q5W186 159 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 GRAMD4Q6IC98 578 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 OGFOD2Q6N063 350 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 CYP20A1Q6UW02 462 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 FKBP9P1Q75LS8 142 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 TMEM125Q96AQ2 219 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 ASB2Q96Q27 587 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 SDR39U1Q9NRG7 319 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 IFT80Q9P2H3 777 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 MYO9BQ13459 2157 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 LOC285095A0A1B0GVY8 99 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 ANKRD66B4E2M5 251 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 MLYCDO95822 493 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 TTPAP49638 278 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 YBEYP58557 167 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 ATP6V0D1P61421 351 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 ITGADQ13349 1161 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 ABRAXAS2Q15018 415 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 OR2T12Q8NG77 320 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 AUTS2Q8WXX7 1259 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 SEPT8Q92599 483 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 BAG5Q9UL15 447 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 LCHNA4D1U4 455 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 CPSF4O95639 269 aaKnown RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 SMAD3P84022 425 aaKnown RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 KLHL35Q6PF15 583 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 MRPL10Q7Z7H8 261 aaKnown RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 CCDC117Q8IWD4 279 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 SFRP1Q8N474 314 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 TNIP2Q8NFZ5 429 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 UTS2RQ9UKP6 389 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 SNX5Q9Y5X3 404 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 GPR45Q9Y5Y3 372 aa12.5□□□□□ -0.41
PPP4R1-202ENST00000400555 A0A0J9YVX5 310 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 AQP12BA6NM10 295 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 MTX2O75431 263 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 ATE1O95260 518 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 PRAMEF1O95521 474 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 AKT1P31749 480 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 CDK9P50750 372 aaKnown RBP12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 HK3P52790 923 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 FCGRTP55899 365 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 GTF2H2Q13888 395 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 MEP1AQ16819 746 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 SPANXN4Q5MJ08 99 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 PERM1Q5SV97 790 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 KANK2Q63ZY3 851 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 GTF2H2CQ6P1K8 395 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 FUT10Q6P4F1 479 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 ENPP6Q6UWR7 440 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 AQP12AQ8IXF9 295 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 FAM86B1Q8N7N1 296 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 OSCP1Q8WVF1 389 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 TMCO1Q9UM00 188 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 SLC45A1Q9Y2W3 748 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 BPTFQ12830 3046 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 CKBP12277 381 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 AQP1P29972 269 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 CAPGP40121 348 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 NUP107P57740 925 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 TXNL4AP83876 142 aaKnown RBP12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 TNK2Q07912 1038 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 RAB39AQ14964 217 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 AARS2Q5JTZ9 985 aaKnown RBP12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 HECTD3Q5T447 861 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 TMCO2Q7Z6W1 182 aaPredicted RBP12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 SERPINA9Q86WD7 417 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 ZNF555Q8NEP9 628 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 GAB3Q8WWW8 586 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms