RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 UBXN8O00124 270 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 AZIN1O14977 448 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 DYRK3O43781 588 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 PGLSO95336 258 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 CHRNA1P02708 482 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 EIF2S1P05198 315 aaKnown RBP16.9■□□□□ 0.3
PTPRA-205ENST00000399903 FMO4P31512 558 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 LILRA4P59901 499 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 FOXD4Q12950 439 aaPredicted RBP16.9■□□□□ 0.3
PTPRA-205ENST00000399903 CCBE1Q6UXH8 406 aaPredicted RBP16.9■□□□□ 0.3
PTPRA-205ENST00000399903 HACD2Q6Y1H2 254 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 RFPL4BQ6ZWI9 263 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 STRADAQ7RTN6 431 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 DCP1BQ8IZD4 617 aaKnown RBP16.9■□□□□ 0.3
PTPRA-205ENST00000399903 AMBRA1Q9C0C7 1298 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 NTN4Q9HB63 628 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 ABCD2Q9UBJ2 740 aa16.9■□□□□ 0.3
PTPRA-205ENST00000399903 ANGPTL1O95841 491 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 CASP3P42574 277 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 PCID2Q5JVF3 399 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 HDAC2Q92769 488 aaKnown RBP16.89■□□□□ 0.29
PTPRA-205ENST00000399903 CNDP2Q96KP4 475 aaKnown RBP16.89■□□□□ 0.29
PTPRA-205ENST00000399903 MIOSQ9NXC5 875 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 KIAA1257Q9ULG3 409 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 A0A087X1B8 175 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 SMIM35A0A1B0GVV1 85 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 OR51F1A6NGY5 319 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 C1RP00736 705 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 NRG1Q02297 640 aaPredicted RBP16.89■□□□□ 0.29
PTPRA-205ENST00000399903 BST2Q10589 180 aaKnown RBP16.89■□□□□ 0.29
PTPRA-205ENST00000399903 NPTX1Q15818 432 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 KIAA0319Q5VV43 1072 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 C8orf82Q6P1X6 216 aaPredicted RBP16.89■□□□□ 0.29
PTPRA-205ENST00000399903 SUN5Q8TC36 379 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 SH3RF2Q8TEC5 729 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 EDEM1Q92611 657 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 CCDC126Q96EE4 140 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 TBL1YQ9BQ87 522 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 TTYH2Q9BSA4 534 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 EMILIN2Q9BXX0 1053 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 TRMT13Q9NUP7 481 aaKnown RBP16.89■□□□□ 0.29
PTPRA-205ENST00000399903 MRGBPQ9NV56 204 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 PRELID1Q9Y255 219 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 PCDHA9Q9Y5H5 950 aa16.89■□□□□ 0.29
PTPRA-205ENST00000399903 OAS3Q9Y6K5 1087 aaKnown RBP16.89■□□□□ 0.29
PTPRA-205ENST00000399903 PTGESO14684 152 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 MITFO75030 526 aaPredicted RBP16.88■□□□□ 0.29
PTPRA-205ENST00000399903 RBP1P09455 135 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 HRH2P25021 359 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 IL12AP29459 219 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 ACADSBP45954 432 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 TAF6P49848 677 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 DAB2P98082 770 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 MORN1Q5T089 497 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 ENPP6Q6UWR7 440 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 LYSMD2Q8IV50 215 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 STON2Q8WXE9 905 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 ACOX2Q99424 681 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 ZNF221Q9UK13 617 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 BPTFQ12830 3046 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 TCRBV5S2A0A599 114 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 F8W810 466 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 SLC22A1O15245 554 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 SLC25A52Q3SY17 297 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 SULT1C3Q6IMI6 304 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 ALKAL1Q6UXT8 129 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 ZNF540Q8NDQ6 660 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 CENPOQ9BU64 300 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 THUMPD3Q9BV44 507 aaKnown RBP16.88■□□□□ 0.29
PTPRA-205ENST00000399903 BBS2Q9BXC9 721 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 DDIT4Q9NX09 232 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 POLG2Q9UHN1 485 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 A0A1B0GTL3 188 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 PIRO00625 290 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 TFECO14948 347 aaPredicted RBP16.88■□□□□ 0.29
PTPRA-205ENST00000399903 SSX4O60224 188 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 CDK14O94921 469 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 POMCP01189 267 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 C7P10643 843 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 ZNF37AP17032 561 aaPredicted RBP16.88■□□□□ 0.29
PTPRA-205ENST00000399903 CXCR2P25025 360 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 ST13P50502 369 aaKnown RBP16.88■□□□□ 0.29
PTPRA-205ENST00000399903 PPP5CP53041 499 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 SELPLGQ14242 412 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 SMN1Q16637 294 aaKnown RBP16.88■□□□□ 0.29
PTPRA-205ENST00000399903 UNC50Q53HI1 259 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 TRPV1Q8NER1 839 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 OR7G1Q8NGA0 311 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 MYOCQ99972 504 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 PRRG3Q9BZD7 231 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 ZBTB20Q9HC78 741 aaPredicted RBP16.88■□□□□ 0.29
PTPRA-205ENST00000399903 ORC6Q9Y5N6 252 aa16.88■□□□□ 0.29
PTPRA-205ENST00000399903 LOC100130705A0A1B0GUX0 176 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 MBLAC1A4D2B0 266 aaPredicted RBP16.87■□□□□ 0.29
PTPRA-205ENST00000399903 ZSCAN5BA6NJL1 495 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 DNAJB13P59910 316 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 TRAF3Q13114 568 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 DTWD1Q8N5C7 304 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 B3GALNT2Q8NCR0 500 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 C3orf58Q8NDZ4 430 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms