RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 FOXN2P32314 431 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PPM1AP35813 382 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 KLF10Q13118 480 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 COL9A2Q14055 689 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 DPYSL2Q16555 572 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SLC5A9Q2M3M2 681 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ASTE1Q2TB18 679 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 KHDC1Q4VXA5 237 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 TIGD2Q4W5G0 525 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 IL23RQ5VWK5 629 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 POMZP3Q6PJE2 187 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 TXNDC11Q6PKC3 985 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 TMC5Q6UXY8 1006 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PTCHD4Q6ZW05 846 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 DHDDSQ86SQ9 333 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 GPR180Q86V85 440 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.23□□□□□ -1.89
KNL1-202ENST00000399668 FSTL5Q8N475 847 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 OR10A6Q8NH74 314 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 FAM110BQ8TC76 370 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 HEXDCQ8WVB3 486 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 MYO19Q96H55 970 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SLC39A3Q9BRY0 314 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 TTLL2Q9BWV7 592 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SLC25A51Q9H1U9 297 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CRISPLD1Q9H336 500 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 EIF2B4Q9UI10 523 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 ANGPT4Q9Y264 503 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D30Q9Y2I9 924 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 DGKBQ9Y6T7 804 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 TSC2P49815 1807 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CCDC162PA2VCL2 907 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CDK14O94921 469 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 HLA-DQB2P05538 268 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 EPHX1P07099 455 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ACRP10323 421 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 UROSP10746 265 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 HTR1BP28222 390 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 TLX1P31314 330 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 AIF1P55008 147 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 EPS8Q12929 822 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CBX2Q14781 532 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 RALGPS1Q5JS13 557 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SIRPB2Q5JXA9 342 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 C9orf64Q5T6V5 341 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 HLA-DQA1Q5Y7H0 255 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CRELD2Q6UXH1 353 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 PROSER1Q86XN7 944 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CLIP4Q8N3C7 705 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 FAM47BQ8NA70 645 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 KCT2Q8NC54 265 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 RDH11Q8TC12 318 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 XAGE5Q8WWM1 108 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ATL1Q8WXF7 558 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PYCR2Q96C36 320 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PCDHAC1Q9H158 963 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ST6GALNAC4Q9H4F1 302 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ZNF395Q9H8N7 513 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 DUS2Q9NX74 493 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 FCF1Q9Y324 198 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 USF3Q68DE3 2245 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 GLYATL1P3A0A0U1RQE8 302 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 CCDC85CA6NKD9 419 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 TRBC1P01850 177 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 INHAP05111 366 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 CCNYL3P0C7X3 344 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 ZBTB48P10074 688 aaPredicted RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 SELPP16109 830 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 HADHBP55084 474 aaKnown RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 DMPKQ09013 629 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 SMARCB1Q12824 385 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 C2orf27AQ580R0 203 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 CPTPQ5TA50 214 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 ZDHHC24Q6UX98 284 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 ZNF730Q6ZMV8 503 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 CLEC20AQ6ZU45 233 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 HFE2Q6ZVN8 426 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 CHSY3Q70JA7 882 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 ZNF572Q7Z3I7 529 aaPredicted RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 SPATA19Q7Z5L4 167 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 KRT77Q7Z794 578 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 FAM129CQ86XR2 697 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 LRRC49Q8IUZ0 686 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 APLFQ8IW19 511 aaPredicted RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 ENKURQ8TC29 256 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 PTPN18Q99952 460 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 OSBPL11Q9BXB4 747 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 DENND2DQ9H6A0 471 aaPredicted RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 CLK4Q9HAZ1 481 aaKnown RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 RCOR3Q9P2K3 495 aaPredicted RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 RBPJLQ9UBG7 517 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 ENOPH1Q9UHY7 261 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 ADAM30Q9UKF2 790 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 TCAF1Q9Y4C2 921 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 CFAP20Q9Y6A4 193 aaKnown RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 PLXNA3P51805 1871 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 RLFQ13129 1914 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 CCDC189A1A4V9 331 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 NEMP2A6NFY4 417 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 OR6C75A6NL08 312 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms