RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ZMPSTE24O75844 475 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 NR2F6P10588 404 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 RPL17P18621 184 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 CDK9P50750 372 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 ARHGAP40Q5TG30 622 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 CXorf57Q6NSI4 855 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 FUT10Q6P4F1 479 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 CREG2Q8IUH2 290 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 DENND6BQ8NEG7 585 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 TRPV1Q8NER1 839 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 CLP1Q92989 425 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 PIRTP0C851 137 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 KCNJ2P63252 427 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 DACT2Q5SW24 774 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 CFAP206Q8IYR0 622 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 ARL14EPQ8N8R7 260 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 ZBTB8BQ8NAP8 495 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 PFDN2Q9UHV9 154 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 GRIP1Q9Y3R0 1128 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 LOC110117498-PIK3R3F6TDL0 507 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 TRBC1P01850 177 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 FGF1P05230 155 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 PERM1Q5SV97 790 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 AUTS2Q8WXX7 1259 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 PIK3R3Q92569 461 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 PURBQ96QR8 312 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 CUEDC1Q9NWM3 386 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 ZNF490Q9ULM2 529 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 AP1M2Q9Y6Q5 423 aa10.95□□□□□ -0.66
CACNA1C-215ENST00000399637 TMEM150CB9EJG8 249 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 FAM153BP0C7A2 387 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 HOXB6P17509 224 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 CCNOP22674 350 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 SDC2P34741 201 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 MAPK14Q16539 360 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 CPSF6Q16630 551 aaKnown RBP eCLIP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 BMT2Q1RMZ1 405 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 FAM153CQ494X1 144 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 TMPRSS11BQ86T26 416 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 SLC9A9Q8IVB4 645 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 SLC34A3Q8N130 599 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 UPF1Q92900 1129 aaKnown RBP eCLIP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 RBM18Q96H35 190 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 TCF12Q99081 682 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 CDH19Q9H159 772 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 MAGEL2Q9UJ55 1249 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 PADI3Q9ULW8 664 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 CLUHO75153 1309 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 DDX3XO00571 662 aaKnown RBP eCLIP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 AKAP8O43823 692 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 SLC22A3O75751 556 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 C22orf31O95567 290 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 SAGP10523 405 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 MAXP61244 160 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 GCNT6Q5T4J0 391 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 SLC30A6Q6NXT4 461 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 ARCQ7LC44 396 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 ZBTB2Q8N680 514 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 ANKRD52Q8NB46 1076 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 KCT2Q8NC54 265 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 COPS8Q99627 209 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 RIOK2Q9BVS4 552 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 TDRD1Q9BXT4 1180 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 BTBD1Q9H0C5 482 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 MARCH7Q9H992 704 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 PLGRKTQ9HBL7 147 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 BBIP1A8MTZ0 92 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 TUBG1P23258 451 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 PPP3R1P63098 170 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 RNF43Q68DV7 783 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 SPATA6LQ8N4H0 392 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 ZNF670Q9BS34 389 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 OSBPL11Q9BXB4 747 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 LHX5Q9H2C1 402 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 TLR9Q9NR96 1032 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 CYP8B1Q9UNU6 501 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 PRSS55Q6UWB4 352 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 ZNF572Q7Z3I7 529 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 CHST4Q8NCG5 386 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 FAM13CQ8NE31 585 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 ACMSDQ8TDX5 336 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 RNF157Q96PX1 679 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 ACO2Q99798 780 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 ZSCAN5AQ9BUG6 496 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 LACRTQ9GZZ8 138 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 PNPLA3Q9NST1 481 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 SNX7Q9UNH6 387 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 IFT52Q9Y366 437 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 FADS2O95864 444 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 CCR3P51677 355 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 NAGLUP54802 743 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 SEC23AQ15436 765 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 NTRK3Q16288 839 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 PLEKHG6Q3KR16 790 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 OGFRL1Q5TC84 451 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 OR2AJ1Q8NGZ0 328 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 HDAC7Q8WUI4 952 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 RIT1Q92963 219 aa10.94□□□□□ -0.66
CACNA1C-215ENST00000399637 PTPN18Q99952 460 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms