RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 AP2A1O95782 977 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 IGHEP01854 428 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 FBLP22087 321 aaKnown RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 SLC7A1P30825 629 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 C2orf80Q0P641 193 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 FAAP100Q0VG06 881 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 TRIP10Q15642 601 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 MAPK14Q16539 360 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 UPP1Q16831 310 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 LY6G5CQ5SRR4 150 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 MICU2Q8IYU8 434 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 NATD1Q8N6N6 113 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 HORMAD2Q8N7B1 307 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 SMPDL3BQ92485 455 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 ZNF641Q96N77 438 aaPredicted RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 TBL1XR1Q9BZK7 514 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 METTL7AQ9H8H3 244 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 RBM7Q9Y580 266 aaKnown RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 RFXANKO14593 260 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 RAB28P51157 221 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 ITGA1P56199 1179 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 WDR5P61964 334 aaKnown RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 LMAN2Q12907 356 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 POMZP3Q6PJE2 187 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 DNAJC14Q6Y2X3 702 aaPredicted RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 COX18Q8N8Q8 333 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 OR2AJ1Q8NGZ0 328 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 SCAMP5Q8TAC9 235 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 NTAN1Q96AB6 310 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 OR2M4Q96R27 311 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 CLN6Q9NWW5 311 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 PHF11Q9UIL8 331 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 ZNF229Q9UJW7 825 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 TFR2Q9UP52 801 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 PCDHGC4Q9Y5F7 938 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 LTBP4Q8N2S1 1624 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 FAM237BA0A1B0GVD1 139 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 PIGNO95427 931 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 CRADDP78560 199 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 HKDC1Q2TB90 917 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 PLXDC1Q8IUK5 500 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 DCAF4L2Q8NA75 395 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 FAM174AQ8TBP5 190 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 FBRSL1Q9HCM7 1045 aaKnown RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 PTPRHQ9HD43 1115 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 GRXCR2A6NFK2 248 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 GJB5O95377 273 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 GOT2P00505 430 aaKnown RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 CST3P01034 146 aaPredicted RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 CAPN1P07384 714 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 EN2P19622 333 aaPredicted RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 SSTR1P30872 391 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 SHMT2P34897 504 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 KLC1Q07866 573 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 GTF2H2Q13888 395 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 PDK4Q16654 411 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 PRRT3Q5FWE3 981 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 GTF2H2CQ6P1K8 395 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 SCIMPQ6UWF3 145 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 Q6ZVU0 165 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 BTN2A1Q7KYR7 527 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 SCUBE1Q8IWY4 988 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 CACTIN-AS1Q8N1I8 211 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 GFM1Q96RP9 751 aaKnown RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 MATN2O00339 956 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 CLUP10909 449 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 JUNDP17535 347 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ZNF41P51814 821 aaPredicted RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 RPL26P61254 145 aaKnown RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 IL5RAQ01344 420 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 CAMK1Q14012 370 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 NOMO1Q15155 1222 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ZNF805Q5CZA5 627 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 FIP1L1Q6UN15 594 aaKnown RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 ATCAYQ86WG3 371 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 AMIGO1Q86WK6 493 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 DCP2Q8IU60 420 aaKnown RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 OR2T3Q8NH03 318 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 LNX1Q8TBB1 728 aaPredicted RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 KCNV2Q8TDN2 545 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 PHF10Q8WUB8 498 aaKnown RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 SMG9Q9H0W8 520 aaKnown RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 CKLFQ9UBR5 152 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 RPL26L1Q9UNX3 145 aaKnown RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 SNX13Q9Y5W8 968 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 NID2Q14112 1375 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 FAM86C2PA6NEL3 165 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 AZIN1O14977 448 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 SNX4O95219 450 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 SEMA4FO95754 770 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 NTRK1P04629 796 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 COL6A2P12110 1019 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 MMP8P22894 467 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 DEF8Q6ZN54 512 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 MON1BQ7L1V2 547 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 DEPDC4Q8N2C3 294 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ST13P5Q8NFI4 369 aaPredicted RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 TM9SF4Q92544 642 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 RGMAQ96B86 450 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 NTPCRQ9BSD7 190 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms