RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TMF1P82094 1093 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 RUNX1T1Q06455 604 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 LTBQ06643 244 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 TFCP2Q12800 502 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 ZNF155Q12901 538 aaPredicted RBP2.68□□□□□ -1.98
CD47-203ENST00000398258 PRPF4BQ13523 1007 aaKnown RBP2.68□□□□□ -1.98
CD47-203ENST00000398258 NR1D2Q14995 579 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 KRTAP24-1Q3LI83 254 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 IGSF11Q5DX21 431 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 KCNT1Q5JUK3 1230 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 C1orf141Q5JVX7 400 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 KRT80Q6KB66 452 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 TRNP1Q6NT89 227 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 CCDC186Q7Z3E2 898 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 SLFN11Q7Z7L1 901 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 CCDC190Q86UF4 302 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 FJX1Q86VR8 437 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 GALNT13Q8IUC8 556 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 SPATA2LQ8IUW3 424 aaPredicted RBP2.68□□□□□ -1.98
CD47-203ENST00000398258 FOXP4Q8IVH2 680 aaPredicted RBP2.68□□□□□ -1.98
CD47-203ENST00000398258 C1orf87Q8N0U7 546 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 PGBD5Q8N414 524 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 TC2NQ8N9U0 490 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 PAPD5Q8NDF8 572 aaKnown RBP2.68□□□□□ -1.98
CD47-203ENST00000398258 MCUQ8NE86 351 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 CFAP61Q8NHU2 1237 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 BBS10Q8TAM1 723 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 GSDMBQ8TAX9 411 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 ELP5Q8TE02 316 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 DNAAF4Q8WXU2 420 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 ZNF653Q96CK0 615 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 SCMH1Q96GD3 660 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 MED30Q96HR3 178 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 QRFPRQ96P65 431 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 CDRT15Q96T59 188 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 HGH1Q9BTY7 390 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 CCDC106Q9BWC9 280 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 SEZ6LQ9BYH1 1024 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 DNAJC18Q9H819 358 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 NOX4Q9NPH5 578 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 SH3GLB2Q9NR46 395 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 OLAHQ9NV23 265 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 ZNF224Q9NZL3 707 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 WDR35Q9P2L0 1181 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 WNT16Q9UBV4 365 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 DDX25Q9UHL0 483 aaKnown RBP2.68□□□□□ -1.98
CD47-203ENST00000398258 ZHX1Q9UKY1 873 aaPredicted RBP2.68□□□□□ -1.98
CD47-203ENST00000398258 NME7Q9Y5B8 376 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 PTPRCP08575 1304 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 IGLV5-37A0A075B6J1 123 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 hDV102S1A0JD36 115 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 FEZF1A0PJY2 475 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 LINC01553A4QN01 128 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 HEPACAM2A8MVW5 462 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 CCDC188H7C350 402 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 J3QR06 171 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 MID1O15344 667 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 WISP2O76076 250 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 KCNK5O95279 499 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 PAPSS2O95340 614 aaPredicted RBP2.67□□□□□ -1.98
CD47-203ENST00000398258 APOA4P06727 396 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 PRSS2P07478 247 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 CCDC175P0C221 793 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 LINC00271P0C7V0 271 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 VPREB1P12018 145 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 SCG2P13521 617 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 GLULP15104 373 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 NMBRP28336 390 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 LIMK1P53667 647 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 SEC61A1P61619 476 aaKnown RBP2.67□□□□□ -1.98
CD47-203ENST00000398258 MELKQ14680 651 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 PLCB4Q15147 1175 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 MEP1AQ16819 746 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 FAM98BQ52LJ0 330 aaKnown RBP2.67□□□□□ -1.98
CD47-203ENST00000398258 ARMC3Q5W041 872 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 ZDHHC20Q5W0Z9 365 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 CST9LP1Q5W188 147 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 WDR73Q6P4I2 378 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 TEX38Q6PEX7 206 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 GFRALQ6UXV0 394 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 CCNI2Q6ZMN8 369 aaPredicted RBP2.67□□□□□ -1.98
CD47-203ENST00000398258 CHST3Q7LGC8 479 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 ZNF34Q8IZ26 560 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 RBM15BQ8NDT2 890 aaKnown RBP2.67□□□□□ -1.98
CD47-203ENST00000398258 NUDCD2Q8WVJ2 157 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 TANKQ92844 425 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 ABTB1Q969K4 478 aaPredicted RBP2.67□□□□□ -1.98
CD47-203ENST00000398258 RMDN1Q96DB5 314 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 SPACA9Q96E40 222 aaPredicted RBP2.67□□□□□ -1.98
CD47-203ENST00000398258 DOCK7Q96N67 2140 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 ZNF830Q96NB3 372 aaPredicted RBP2.67□□□□□ -1.98
CD47-203ENST00000398258 ZNF385AQ96PM9 386 aaKnown RBP2.67□□□□□ -1.98
CD47-203ENST00000398258 SMC6Q96SB8 1091 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 DDOQ99489 341 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 SLC25A23Q9BV35 468 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 MOV10L1Q9BXT6 1211 aaKnown RBP2.67□□□□□ -1.98
CD47-203ENST00000398258 ANKRD2Q9GZV1 360 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 RAD21L1Q9H4I0 556 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 GAREM1Q9H706 876 aa2.67□□□□□ -1.98
CD47-203ENST00000398258 PIH1D3Q9NQM4 214 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms