RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 ARSDP51689 593 aa18.47■□□□□ 0.55
COLCA2-201ENST00000398035 ZFP36L1Q07352 338 aaKnown RBP18.47■□□□□ 0.55
COLCA2-201ENST00000398035 CYP4F3Q08477 520 aa18.47■□□□□ 0.55
COLCA2-201ENST00000398035 WDR36Q8NI36 951 aaKnown RBP18.47■□□□□ 0.55
COLCA2-201ENST00000398035 ZCCHC14Q8WYQ9 949 aaKnown RBP18.47■□□□□ 0.55
COLCA2-201ENST00000398035 CPT1BQ92523 772 aa18.47■□□□□ 0.55
COLCA2-201ENST00000398035 CXorf40BQ96DE9 158 aa18.47■□□□□ 0.55
COLCA2-201ENST00000398035 KIFC1Q9BW19 673 aa18.47■□□□□ 0.55
COLCA2-201ENST00000398035 PCDHB1Q9Y5F3 818 aa18.47■□□□□ 0.55
COLCA2-201ENST00000398035 PCDHGA8Q9Y5G5 932 aa18.47■□□□□ 0.55
COLCA2-201ENST00000398035 CCDC187A0A096LP49 1063 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 CCDC78A2IDD5 438 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 SDR42E2A6NKP2 422 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 GOT2P00505 430 aaKnown RBP18.46■□□□□ 0.55
COLCA2-201ENST00000398035 CASQ1P31415 396 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 FOXN2P32314 431 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 MLLT3P42568 568 aaPredicted RBP18.46■□□□□ 0.55
COLCA2-201ENST00000398035 CDKN1CP49918 316 aaPredicted RBP18.46■□□□□ 0.55
COLCA2-201ENST00000398035 DRG2P55039 364 aaKnown RBP18.46■□□□□ 0.55
COLCA2-201ENST00000398035 UBE2IP63279 158 aaKnown RBP18.46■□□□□ 0.55
COLCA2-201ENST00000398035 TRA2AQ13595 282 aaKnown RBP eCLIP18.46■□□□□ 0.55
COLCA2-201ENST00000398035 MAP9Q49MG5 647 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 WDR74Q6RFH5 385 aaPredicted RBP18.46■□□□□ 0.55
COLCA2-201ENST00000398035 IGF2-ASQ6U949 168 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 PACS1Q6VY07 963 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 USP53Q70EK8 1073 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 PPIL6Q8IXY8 311 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 PIANPQ8IYJ0 282 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 OR4D9Q8NGE8 314 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 ZFPM2Q8WW38 1151 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 ATXN7L3BQ96GX2 97 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 CAPZA3Q96KX2 299 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 CMKLR1Q99788 373 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 SAMD15Q9P1V8 674 aa18.46■□□□□ 0.55
COLCA2-201ENST00000398035 LILRA5A6NI73 299 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 PFDN6O15212 129 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 DUX1O43812 170 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 DXOO77932 396 aaKnown RBP18.45■□□□□ 0.54
COLCA2-201ENST00000398035 BRAFP15056 766 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 PAMP19021 973 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 RBMS1P29558 406 aaKnown RBP18.45■□□□□ 0.54
COLCA2-201ENST00000398035 SLC19A1P41440 591 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 ETF1P62495 437 aaKnown RBP18.45■□□□□ 0.54
COLCA2-201ENST00000398035 PLOD1Q02809 727 aaPredicted RBP18.45■□□□□ 0.54
COLCA2-201ENST00000398035 SEPT7Q16181 437 aaKnown RBP18.45■□□□□ 0.54
COLCA2-201ENST00000398035 DBN1Q16643 649 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 ST3GAL2Q16842 350 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 TMEM71Q6P5X7 295 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 TMEM26Q6ZUK4 368 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 PROSER1Q86XN7 944 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 CFAP206Q8IYR0 622 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 MPP5Q8N3R9 675 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 HM13Q8TCT9 377 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 ZNF778Q96MU6 729 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 DDX47Q9H0S4 455 aaKnown RBP18.45■□□□□ 0.54
COLCA2-201ENST00000398035 SLC40A1Q9NP59 571 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 TREX1Q9NSU2 369 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 SCHIP1Q9P0W5 487 aaPredicted RBP18.45■□□□□ 0.54
COLCA2-201ENST00000398035 ZNF624Q9P2J8 865 aaPredicted RBP18.45■□□□□ 0.54
COLCA2-201ENST00000398035 SLC2A6Q9UGQ3 507 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 ATXN7L1Q9ULK2 861 aaPredicted RBP18.45■□□□□ 0.54
COLCA2-201ENST00000398035 CEP295Q9C0D2 2601 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 KNTC1P50748 2209 aa18.45■□□□□ 0.54
COLCA2-201ENST00000398035 GOLGA4Q13439 2230 aaKnown RBP18.45■□□□□ 0.54
COLCA2-201ENST00000398035 TCRBV7S3A2A0A539 114 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 SMAPO00193 183 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 SGTAO43765 313 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 OR56A5P0C7T3 313 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 MGAT1P26572 445 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 PPM1FP49593 454 aaPredicted RBP18.44■□□□□ 0.54
COLCA2-201ENST00000398035 TTPAP49638 278 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 RPA4Q13156 261 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 NFE2L1Q14494 772 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 CLCA4Q14CN2 919 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 ZNF534Q76KX8 674 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 SDCCAG8Q86SQ7 713 aaPredicted RBP18.44■□□□□ 0.54
COLCA2-201ENST00000398035 MDM1Q8TC05 714 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 ZNF578Q96N58 590 aaPredicted RBP18.44■□□□□ 0.54
COLCA2-201ENST00000398035 TSSK1BQ9BXA7 367 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 RDH14Q9HBH5 336 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 ASIC3Q9UHC3 531 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 SOX13Q9UN79 622 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 HEBP2Q9Y5Z4 205 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 COLEC10Q9Y6Z7 277 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 ACACBO00763 2458 aa18.44■□□□□ 0.54
COLCA2-201ENST00000398035 HGSO14964 777 aaPredicted RBP18.43■□□□□ 0.54
COLCA2-201ENST00000398035 FTH1P02794 183 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 MPOP05164 745 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 SLC35G4P0C7Q5 338 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 NDUFS1P28331 727 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 PDX1P52945 283 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 LIMK2P53671 638 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 ERVPABLB-1P60509 514 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 GABREP78334 506 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 PTK6Q13882 451 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 CASC4Q6P4E1 433 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 KLHL35Q6PF15 583 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 RAB11FIP2Q7L804 512 aa18.43■□□□□ 0.54
COLCA2-201ENST00000398035 CAND1Q86VP6 1230 aaKnown RBP18.43■□□□□ 0.54
COLCA2-201ENST00000398035 HOOK3Q86VS8 718 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms