RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 C8orf82Q6P1X6 216 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TMEM173Q86WV6 379 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TREML1Q86YW5 311 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PQLC1Q8N2U9 271 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 MICAL1Q8TDZ2 1067 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ELMO3Q96BJ8 720 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 AIG1Q9NVV5 245 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ACACAQ13085 2346 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ZFC3H1O60293 1989 aaKnown RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PRAMEF1O95521 474 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 GOT2P00505 430 aaKnown RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SRCP12931 536 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SSTR3P32745 418 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ARSDP51689 593 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 KCNJ2P63252 427 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TWF1Q12792 350 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 LAPTM5Q13571 262 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 INPP5AQ14642 412 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CYTH1Q15438 398 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PIGGQ5H8A4 983 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TMEM240Q5SV17 173 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CEP57Q86XR8 500 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 RGL4Q8IZJ4 473 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 FBXW8Q8N3Y1 598 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TTLQ8NG68 377 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ASB11Q8WXH4 323 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 DNAJC9Q8WXX5 260 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SMARCD2Q92925 531 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF778Q96MU6 729 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PRPF18Q99633 342 aaKnown RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 HDAC8Q9BY41 377 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 EHD3Q9NZN3 535 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ADAM29Q9UKF5 820 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 RAB26Q9ULW5 256 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 E5RI56 91 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 RSL1D1O76021 490 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CYP2A7P20853 494 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 GTF2A1P52655 376 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CLCQ05315 142 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PAGE2BQ5JRK9 111 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 TFAP2DQ7Z6R9 452 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PHYKPLQ8IUZ5 450 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 DENND6AQ8IWF6 608 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 LSMEM2Q8N112 164 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CARFQ8N187 725 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 SDR16C5Q8N3Y7 309 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 SRFBP1Q8NEF9 429 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 DNASE1L2Q92874 299 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 ASIC4Q96FT7 647 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 INSM2Q96T92 566 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 FBXO6Q9NRD1 293 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CACNA2D2Q9NY47 1150 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 ACSL5Q9ULC5 683 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 DNAJC15Q9Y5T4 150 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 GOLGA8RI6L899 631 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PI15O43692 258 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 EEDO75530 441 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PRSS23O95084 383 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PIK3R1P27986 724 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 SLC6A4P31645 630 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 GNPDA1P46926 289 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 TUBA4AP68366 448 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 DMPKQ09013 629 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 ZSWIM7Q19AV6 140 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PRSS36Q5K4E3 855 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PTRHD1Q6GMV3 140 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PLD6Q8N2A8 252 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 LENG8Q96PV6 779 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 SNX6Q9UNH7 406 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 SLC28A1O00337 649 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 TGM5O43548 720 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 MTAPQ13126 283 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 VEZF1Q14119 521 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 EFTUD2Q15029 972 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CACHD1Q5VU97 1274 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 TICAM1Q8IUC6 712 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 SYNPOQ8N3V7 929 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PGBD5Q8N414 524 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PTGR2Q8N8N7 351 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CCDC138Q96M89 665 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 IER2Q9BTL4 223 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 FAM120CQ9NX05 1096 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 SPATA7Q9P0W8 599 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PRR5-ARHGAP8B1AHC4 643 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 ANGPT2O15123 496 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 FFAR2O15552 330 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 SCELO95171 688 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 AOAHP28039 575 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 NRLP54845 237 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 ARHGAP8P85298 464 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 ABHD18Q0P651 414 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CTBP1Q13363 440 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CDKN3Q16667 212 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 KANK2Q63ZY3 851 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CAMK1DQ8IU85 385 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 ADAMTS19Q8TE59 1207 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 AGAP11Q8TF27 550 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 NR4A3Q92570 626 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CNDP2Q96KP4 475 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 KLF6Q99612 283 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms