RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 BLOC1S5Q8TDH9 187 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 KCNJ9Q92806 393 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 OXCT2Q9BYC2 517 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PCDHAC1Q9H158 963 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 FBXO44Q9H4M3 255 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ALG9Q9H6U8 611 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 DYRK4Q9NR20 520 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 LATS2Q9NRM7 1088 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SACM1LQ9NTJ5 587 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 DUS2Q9NX74 493 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ING3Q9NXR8 418 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 WWOXQ9NZC7 414 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 MRPL42Q9Y6G3 142 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 C9JVG2 144 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 VILLO15195 856 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SSNA1O43805 119 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SYNCRIPO60506 623 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 KLHL18O94889 574 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 AMHP03971 560 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ITIH1P19827 911 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PPP3CCP48454 512 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 GABARAPL2P60520 117 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 NKX3-2P78367 333 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 GRB14Q14449 540 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 NR6A1Q15406 480 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TBC1D25Q3MII6 688 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PLA2G4EQ3MJ16 856 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PARP15Q460N3 678 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SYPL2Q5VXT5 272 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SULT1C3Q6IMI6 304 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 MSANTD1Q6ZTZ1 278 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 BHLHA9Q7RTU4 235 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SCN4BQ8IWT1 228 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ADGRG5Q8IZF4 528 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 STK40Q8N2I9 435 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 NETO2Q8NC67 525 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ARRDC4Q8NCT1 418 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 HEXDCQ8WVB3 486 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 C19orf60Q96EN9 201 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SLC39A13Q96H72 371 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CELF6Q96J87 481 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CCNB1IP1Q9NPC3 277 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ADPRHL2Q9NX46 363 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 STOML2Q9UJZ1 356 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 LOC285095A0A1B0GVY8 99 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 FUOMA2VDF0 154 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 A8MV72 311 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PTPN5P54829 565 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TSNQ15631 228 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 FAM171BQ6P995 826 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 NPWQ8N729 165 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 EFHBQ8N7U6 833 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TXNDC5Q8NBS9 432 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 GRPEL2Q8TAA5 225 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SPPL2AQ8TCT8 520 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 MCOLN3Q8TDD5 553 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TRUB1Q8WWH5 349 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SLC47A1Q96FL8 570 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 B3GALT6Q96L58 329 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 HEPHQ9BQS7 1158 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 LRRC3Q9BY71 257 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 DPY30Q9C005 99 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TRIM45Q9H8W5 580 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 HEBP1Q9NRV9 189 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TUBGCP4Q9UGJ1 667 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 RAPGEFL1Q9UHV5 662 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PTGESO14684 152 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PLOD3O60568 738 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CPNE3O75131 537 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 UGT2B4P06133 528 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 GSTT2P0CG29 244 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 GSTT2BP0CG30 244 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 MSH3P20585 1137 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 FDXRP22570 491 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 DCKP27707 260 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 RRM2P31350 389 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ELAVL2Q12926 359 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 C1DQ13901 141 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ZRANB3Q5FWF4 1079 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TREML2Q5T2D2 321 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 C11orf88Q6PI97 169 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 RASSF6Q6ZTQ3 369 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 USP50Q70EL3 339 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ZC3H7AQ8IWR0 971 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ADHFE1Q8IWW8 467 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 MYDGFQ969H8 173 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ATOH8Q96SQ7 321 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SEZ6LQ9BYH1 1024 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 KLHL1Q9NR64 748 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 C3orf18Q9UK00 162 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 A0A0G2JMZ2 1700 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 A0A1W2PRG6 482 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PRORSD1PA6NEY8 169 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF99A8MXY4 864 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 H3BMM5 538 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CHRNGP07510 517 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ODC1P11926 461 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 NCAM1P13591 858 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ARNTP27540 789 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PUDPQ08623 228 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms