RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 IGHV1OR15-9A0A0B4J2B8 117 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 QSOX1O00391 747 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 PI15O43692 258 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 MAGEC1O60732 1142 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 APOA4P06727 396 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 CD6P30203 668 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 KCNC1P48547 511 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 KLC3Q6P597 504 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 TMEM220Q6QAJ8 160 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 OTOAQ7RTW8 1153 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 CAMKK1Q8N5S9 505 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 LINGO1Q96FE5 620 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 PDLIM5Q96HC4 596 aaKnown RBP27.08■■□□□ 1.92
CPNE1-203ENST00000397442 MRPL46Q9H2W6 279 aaKnown RBP27.08■■□□□ 1.92
CPNE1-203ENST00000397442 EBF2Q9HAK2 575 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 TMEM98Q9Y2Y6 226 aa27.08■■□□□ 1.92
CPNE1-203ENST00000397442 BIRC5O15392 142 aa27.07■■□□□ 1.92
CPNE1-203ENST00000397442 VEGFDO43915 354 aa27.07■■□□□ 1.92
CPNE1-203ENST00000397442 IGHV4-34P06331 123 aa27.07■■□□□ 1.92
CPNE1-203ENST00000397442 ZNF8P17098 575 aaPredicted RBP27.07■■□□□ 1.92
CPNE1-203ENST00000397442 KPNA2P52292 529 aaKnown RBP27.07■■□□□ 1.92
CPNE1-203ENST00000397442 GBX1Q14549 363 aa27.07■■□□□ 1.92
CPNE1-203ENST00000397442 BCL7AQ4VC05 210 aa27.07■■□□□ 1.92
CPNE1-203ENST00000397442 ACSBG2Q5FVE4 666 aa27.07■■□□□ 1.92
CPNE1-203ENST00000397442 FAM160A2Q8N612 972 aaPredicted RBP27.07■■□□□ 1.92
CPNE1-203ENST00000397442 DENND6BQ8NEG7 585 aa27.07■■□□□ 1.92
CPNE1-203ENST00000397442 MYOCQ99972 504 aa27.07■■□□□ 1.92
CPNE1-203ENST00000397442 SIRPGQ9P1W8 387 aa27.07■■□□□ 1.92
CPNE1-203ENST00000397442 K7ESF4 209 aa27.06■■□□□ 1.92
CPNE1-203ENST00000397442 FTH1P02794 183 aa27.06■■□□□ 1.92
CPNE1-203ENST00000397442 CPA3P15088 417 aa27.06■■□□□ 1.92
CPNE1-203ENST00000397442 ALDH3A1P30838 453 aa27.06■■□□□ 1.92
CPNE1-203ENST00000397442 CXCL12P48061 93 aa27.06■■□□□ 1.92
CPNE1-203ENST00000397442 ZNF547Q8IVP9 402 aa27.06■■□□□ 1.92
CPNE1-203ENST00000397442 IER2Q9BTL4 223 aa27.06■■□□□ 1.92
CPNE1-203ENST00000397442 ALG9Q9H6U8 611 aa27.06■■□□□ 1.92
CPNE1-203ENST00000397442 TECTAO75443 2155 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 TMEM202A6NGA9 273 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 RBP1P09455 135 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 KCNA4P22459 653 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 CCR5P51681 352 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 ATP6V0D1P61421 351 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 OR4D1Q15615 310 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 ZNF658BQ4V348 819 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-203ENST00000397442 KIAA0895LQ68EN5 471 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 MAMSTRQ6ZN01 415 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 RDH11Q8TC12 318 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 ZNF317Q96PQ6 595 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-203ENST00000397442 GPR174Q9BXC1 333 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 TFB2MQ9H5Q4 396 aaKnown RBP27.05■■□□□ 1.92
CPNE1-203ENST00000397442 GULP1Q9UBP9 304 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 PCYT1BQ9Y5K3 369 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-203ENST00000397442 CHUKO15111 745 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 MYCLP1P12525 358 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-203ENST00000397442 TAC1P20366 129 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 ZYG11AQ6WRX3 759 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 RGS9BPQ6ZS82 235 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 PIWIL4Q7Z3Z4 852 aaKnown RBP27.05■■□□□ 1.92
CPNE1-203ENST00000397442 NUDCD3Q8IVD9 361 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 C10orf107Q8IVU9 208 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 FOXJ1Q92949 421 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 KIAA1191Q96A73 305 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 TSSK1BQ9BXA7 367 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 PHPT1Q9NRX4 125 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-203ENST00000397442 CDYLQ9Y232 598 aa27.05■■□□□ 1.92
CPNE1-203ENST00000397442 POM121BA6NF01 834 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 F8W8V4 182 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 CDC7O00311 574 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 HNRNPA2B1P22626 353 aaKnown RBP27.04■■□□□ 1.92
CPNE1-203ENST00000397442 DGKAP23743 735 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 TTLL9Q3SXZ7 439 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 TJAP1Q5JTD0 557 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 DOK6Q6PKX4 331 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 RHEBL1Q8TAI7 183 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 ZNF75CPQ92670 426 aaPredicted RBP27.04■■□□□ 1.92
CPNE1-203ENST00000397442 ZNF514Q96K75 400 aaPredicted RBP27.04■■□□□ 1.92
CPNE1-203ENST00000397442 CCM2Q9BSQ5 444 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 APOOQ9BUR5 198 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 PSD3Q9NYI0 1048 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 GPR34Q9UPC5 381 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 CA5BQ9Y2D0 317 aa27.04■■□□□ 1.92
CPNE1-203ENST00000397442 BGNP21810 368 aa27.03■■□□□ 1.92
CPNE1-203ENST00000397442 SEC24CP53992 1094 aa27.03■■□□□ 1.92
CPNE1-203ENST00000397442 CLDN2P57739 230 aa27.03■■□□□ 1.92
CPNE1-203ENST00000397442 GTF2H3Q13889 308 aa27.03■■□□□ 1.92
CPNE1-203ENST00000397442 CES4AQ5XG92 561 aa27.03■■□□□ 1.92
CPNE1-203ENST00000397442 CYHR1Q6ZMK1 362 aa27.03■■□□□ 1.92
CPNE1-203ENST00000397442 ELMO1Q92556 727 aa27.03■■□□□ 1.92
CPNE1-203ENST00000397442 BIRC7Q96CA5 298 aa27.03■■□□□ 1.92
CPNE1-203ENST00000397442 ATOH8Q96SQ7 321 aa27.03■■□□□ 1.92
CPNE1-203ENST00000397442 NPEPPSL1A6NEC2 478 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 KPNA5O15131 536 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 NUAK1O60285 661 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 DLX3O60479 287 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 GPC4O75487 556 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 CBSLP0DN79 551 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 MYL2P10916 166 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 CBSP35520 551 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 MAGEA9P43362 315 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 RGS4P49798 205 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms