RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 NELFEP18615 380 aaKnown RBP8.6□□□□□ -1.03
CAPN3-208ENST00000397204 IDSP22304 550 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 SSR1P43307 286 aaKnown RBP8.6□□□□□ -1.03
CAPN3-208ENST00000397204 PMS2P54278 862 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 DCDC1P59894 354 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 SEMA5AQ13591 1074 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 DPYSL3Q14195 570 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 INSCQ1MX18 579 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 ATP13A4Q4VNC1 1196 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 TDRD12Q587J7 1177 aaKnown RBP8.6□□□□□ -1.03
CAPN3-208ENST00000397204 FIGNQ5HY92 759 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 ZNF569Q5MCW4 686 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 E4F1Q66K89 784 aaPredicted RBP8.6□□□□□ -1.03
CAPN3-208ENST00000397204 KLHL35Q6PF15 583 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 TMC3Q7Z5M5 1100 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 LRRTM4Q86VH4 590 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 TRAM1L1Q8N609 369 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 CCNYQ8ND76 341 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 GPR26Q8NDV2 337 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 THAP4Q8WY91 577 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 UBXN4Q92575 508 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 SYN2Q92777 582 aaPredicted RBP8.6□□□□□ -1.03
CAPN3-208ENST00000397204 EID2BQ96D98 161 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 BTBD6Q96KE9 485 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 SRPK1Q96SB4 655 aaKnown RBP8.6□□□□□ -1.03
CAPN3-208ENST00000397204 ZNF670Q9BS34 389 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 TIMM29Q9BSF4 260 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 NUP85Q9BW27 656 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 THAP2Q9H0W7 228 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 GPAMQ9HCL2 828 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 ARFGAP3Q9NP61 516 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 LHX9Q9NQ69 397 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 POT1Q9NUX5 634 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 LNPEPQ9UIQ6 1025 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 ANAPC7Q9UJX3 599 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 NBPF19A0A087WUL8 3843 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 DOPEY1Q5JWR5 2465 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 A0A1B0GTH6 734 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 KIF1CO43896 1103 aaKnown RBP8.59□□□□□ -1.03
CAPN3-208ENST00000397204 HLA-DQB2P05538 268 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 BRAFP15056 766 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 NR1D1P20393 614 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 CASP14P31944 242 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 CD86P42081 329 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 CAPZBP47756 277 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 LEPRP48357 1165 aaKnown RBP8.59□□□□□ -1.03
CAPN3-208ENST00000397204 RPS15P62841 145 aaKnown RBP8.59□□□□□ -1.03
CAPN3-208ENST00000397204 SLC10A2Q12908 348 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-208ENST00000397204 DNASE1L3Q13609 305 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 NR1I3Q14994 352 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 ZNF648Q5T619 568 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-208ENST00000397204 FHL5Q5TD97 284 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 HGSNATQ68CP4 663 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 CAPRIN2Q6IMN6 1127 aaKnown RBP8.59□□□□□ -1.03
CAPN3-208ENST00000397204 CCDC70Q6NSX1 233 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 ZNF547Q8IVP9 402 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 CNTD1Q8N815 330 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 SIDT2Q8NBJ9 832 aaKnown RBP8.59□□□□□ -1.03
CAPN3-208ENST00000397204 DTX3LQ8TDB6 740 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 BRSK1Q8TDC3 778 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 FAF2Q96CS3 445 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 HDAC11Q96DB2 347 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 CXorf40BQ96DE9 158 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 ELMO2Q96JJ3 720 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 SLC41A2Q96JW4 573 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 TRIB3Q96RU7 358 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 BPIFA3Q9BQP9 254 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 GPR63Q9BZJ6 419 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 MLXIPLQ9NP71 852 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 DTLQ9NZJ0 730 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 LCMT1Q9UIC8 334 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 RARRES3Q9UL19 164 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 SHOC2Q9UQ13 582 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 DNAJC16Q9Y2G8 782 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 PCDHGA9Q9Y5G4 932 aaKnown RBP8.59□□□□□ -1.03
CAPN3-208ENST00000397204 CRYBG3Q68DQ2 2970 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 ESPL1Q14674 2120 aa8.59□□□□□ -1.03
CAPN3-208ENST00000397204 LRBAP50851 2863 aa8.59□□□□□ -1.04
CAPN3-208ENST00000397204 SEC16AO15027 2179 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 IGHV5-51A0A0C4DH38 117 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 A0A1W2PQJ5 194 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 OR52A4PA6NMU1 304 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 KCNK1O00180 336 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 PROSCO94903 275 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 AGFG2O95081 481 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 SERPING1P05155 500 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 BPIP17213 487 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 RPL10P27635 214 aaKnown RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 PTPN4P29074 926 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 HALP42357 657 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 IFI35P80217 286 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 PDE1BQ01064 536 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 ACY1Q03154 408 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 GBE1Q04446 702 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 CDK18Q07002 472 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 TMEM115Q12893 351 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 GPR18Q14330 331 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 UGT8Q16880 541 aa8.58□□□□□ -1.04
CAPN3-208ENST00000397204 PAPD7Q5XG87 772 aaKnown RBP8.58□□□□□ -1.04
CAPN3-208ENST00000397204 PWWP2BQ6NUJ5 590 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms