RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 A0A1W2PNU3 283 aaPredicted RBP14.33□□□□□ -0.12
SEC13-208ENST00000397109 GAPDHSO14556 408 aaPredicted RBP14.33□□□□□ -0.12
SEC13-208ENST00000397109 PLD2O14939 933 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 SRP72O76094 671 aaKnown RBP14.33□□□□□ -0.12
SEC13-208ENST00000397109 GAS8O95995 478 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 IFNB1P01574 187 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 MSH3P20585 1137 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 IDSP22304 550 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 CD1CP29017 333 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 ZNF140P52738 457 aaPredicted RBP14.33□□□□□ -0.12
SEC13-208ENST00000397109 PCBP4P57723 403 aaKnown RBP14.33□□□□□ -0.12
SEC13-208ENST00000397109 SLC7A5Q01650 507 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 SNX1Q13596 522 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 PTPRCAPQ14761 206 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 CCDC137Q6PK04 289 aaKnown RBP14.33□□□□□ -0.12
SEC13-208ENST00000397109 WASH2PQ6VEQ5 465 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 USP53Q70EK8 1073 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 ZNF547Q8IVP9 402 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 SLITRK4Q8IW52 837 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 MREGQ8N565 214 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 CCDC89Q8N998 374 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 OR10G6Q8NH81 332 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 ULK4Q96C45 1275 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 PRR11Q96HE9 360 aaPredicted RBP14.33□□□□□ -0.12
SEC13-208ENST00000397109 AHCYL2Q96HN2 611 aaKnown RBP14.33□□□□□ -0.12
SEC13-208ENST00000397109 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 DDX47Q9H0S4 455 aaKnown RBP14.33□□□□□ -0.12
SEC13-208ENST00000397109 ASB8Q9H765 288 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 MED4Q9NPJ6 270 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 ASCL3Q9NQ33 180 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 WASH6PQ9NQA3 447 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 PRDM8Q9NQV8 689 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 CPNE7Q9UBL6 633 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 FKBPLQ9UIM3 349 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 DSPP15924 2871 aaKnown RBP14.33□□□□□ -0.12
SEC13-208ENST00000397109 FAM208BQ5VWN6 2430 aa14.33□□□□□ -0.12
SEC13-208ENST00000397109 KLHL33A6NCF5 533 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 LDB2O43679 373 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 SASH3O75995 380 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 ITGA2BP08514 1039 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 XRCC1P18887 633 aaPredicted RBP14.32□□□□□ -0.12
SEC13-208ENST00000397109 ITGALP20701 1170 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 AKT1P31749 480 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 KCNJ1P48048 391 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 XIAPP98170 497 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 DR1Q01658 176 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 NFATC2Q13469 925 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 TRA2AQ13595 282 aaKnown RBP eCLIP14.32□□□□□ -0.12
SEC13-208ENST00000397109 PLA2G4EQ3MJ16 856 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 PHF19Q5T6S3 580 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 AGAP9Q5VTM2 703 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 FOXR1Q6PIV2 292 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 C4orf22Q6V702 233 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 AMZ2Q86W34 360 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 RASGEF1AQ8N9B8 481 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 ZNF248Q8NDW4 579 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 OR13C4Q8NGS5 318 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 GRK7Q8WTQ7 553 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 STYXQ8WUJ0 223 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 HEXDCQ8WVB3 486 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 CMKLR1Q99788 373 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 ERP44Q9BS26 406 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 EPB41L1Q9H4G0 881 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 RDH14Q9HBH5 336 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 ETNK1Q9HBU6 452 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 PAK5Q9P286 719 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 DNAJC16Q9Y2G8 782 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 NEU2Q9Y3R4 380 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 KCTD3Q9Y597 815 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 SLC30A1Q9Y6M5 507 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 WDFY3Q8IZQ1 3526 aa14.32□□□□□ -0.12
SEC13-208ENST00000397109 PRR19A6NJB7 356 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 AGAP14A8MT82 685 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 PDZK1P1A8MUH7 402 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 CDRT15L2A8MXV6 281 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 E7EVH7 732 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 DUX1O43812 170 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 POP7O75817 140 aaKnown RBP14.31□□□□□ -0.12
SEC13-208ENST00000397109 TNFSF15O95150 251 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 JMJD7P0C870 316 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 RALBP11234 206 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 LMAN1P49257 510 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 EPHA4P54764 986 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 DMPKQ09013 629 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 CDH17Q12864 832 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 LAMB3Q13751 1172 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 GPR33Q49SQ1 333 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 TMEM220Q6QAJ8 160 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 SNX20Q7Z614 316 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 C11orf96Q7Z7L8 435 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 CLEC14AQ86T13 490 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 TRIM48Q8IWZ4 208 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 OR4D9Q8NGE8 314 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 CCDC97Q96F63 343 aaPredicted RBP14.31□□□□□ -0.12
SEC13-208ENST00000397109 DCUN1D1Q96GG9 259 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 NUDT22Q9BRQ3 303 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 SEMA6CQ9H3T2 930 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 UCK1Q9HA47 277 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 CRLS1Q9UJA2 301 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms