RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 SEC14L3Q9UDX4 400 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 FAM149AA5PLN7 773 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 FADS2P1A8MWK0 482 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 ADAMDEC1O15204 470 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 PRKD3O94806 890 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 SLC25A14O95258 325 aaPredicted RBP10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 ASLP04424 464 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 MAGP20916 626 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 CLK3P49761 638 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 AQP4P55087 323 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 SMARCB1Q12824 385 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 DUS1LQ6P1R4 473 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 C17orf64Q86WR6 236 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 SPPL2BQ8TCT7 592 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 MFSD3Q96ES6 412 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 SLC25A51Q9H1U9 297 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 FAM105AQ9NUU6 356 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 MKLN1Q9UL63 735 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 CNTN6Q9UQ52 1028 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 WASF2Q9Y6W5 498 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 WTIPA6NIX2 430 aaPredicted RBP10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 H0Y858 1186 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 FPGTO14772 594 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 SLC30A4O14863 429 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 AQP1P29972 269 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 ZNF697Q5TEC3 545 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 FSTL4Q6MZW2 842 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 AHSA2Q719I0 299 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 ZNF248Q8NDW4 579 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 RERGQ96A58 199 aaPredicted RBP10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 DIRAS2Q96HU8 199 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 SPACA7Q96KW9 195 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 GPR21Q99679 349 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 NUSAP1Q9BXS6 441 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 FOXO6A8MYZ6 492 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 AIREO43918 545 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 SLC25A12O75746 678 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 CLDN9O95484 217 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 GJB1P08034 283 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 F8A1P23610 371 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 SSR2P43308 183 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 ALDH3A2P51648 485 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 MPP1Q00013 466 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 TUSC3Q13454 348 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 IKBKEQ14164 716 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 USP41Q3LFD5 358 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 VSTM1Q6UX27 236 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 SYNPOQ8N3V7 929 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 ZNF615Q8N8J6 731 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 C11orf24Q96F05 449 aaPredicted RBP10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 MCCC1Q96RQ3 725 aaPredicted RBP10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 KAT8Q9H7Z6 458 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 IPPKQ9H8X2 491 aa10.16□□□□□ -0.78
LIMCH1-203ENST00000396595 COL5A2P05997 1499 aaPredicted RBP10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 CNTNAP1P78357 1384 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 MROH1Q8NDA8 1641 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 ISM1B1AKI9 464 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 M0QX08 132 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 IFNW1P05000 195 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 GNAO1P09471 354 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 CLUP10909 449 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 ZNF3P17036 446 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 PTX3P26022 381 aaPredicted RBP10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 L1CAMP32004 1257 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 ECT2LQ008S8 904 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 IL18Q14116 193 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 CLEC6AQ6EIG7 209 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 SERPINA13PQ6UXR4 307 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 UNC5BQ8IZJ1 945 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 ADGRG2Q8IZP9 1017 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 ZNF567Q8N184 647 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 GALNT15Q8N3T1 639 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 C10orf82Q8WW14 230 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 LPPQ93052 612 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 EBF3Q9H4W6 596 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 METTL8Q9H825 291 aaKnown RBP10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 TMEM39AQ9NV64 488 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 POLR3BQ9NW08 1133 aaPredicted RBP10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 MAT2BQ9NZL9 334 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 ZNF510Q9Y2H8 683 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 GLYATL1P3A0A0U1RQE8 302 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 C9P02748 559 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 MNDAP41218 407 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 ACTR3P61158 418 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 CA9Q16790 459 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 RALGPS1Q5JS13 557 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 LDLRAP1Q5SW96 308 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 LCN1P1Q5VSP4 162 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 ZNF280BQ86YH2 543 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 ZBTB2Q8N680 514 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 TRPV3Q8NET8 790 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 AIF1LQ9BQI0 150 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 MIOSQ9NXC5 875 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 SLC27A6Q9Y2P4 619 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 DHRS7Q9Y394 339 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 GRIP1Q9Y3R0 1128 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 E7ENX8 843 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 H6PDO95479 791 aa10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 CST3P01034 146 aaPredicted RBP10.15□□□□□ -0.78
LIMCH1-203ENST00000396595 ASGR1P07306 291 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms