RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 COL6A1P12109 1028 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 PEX2P28328 305 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 HOXC12P31275 282 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 CEP76Q8TAP6 659 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 APOLD1Q96LR9 279 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 UNC93B1Q9H1C4 597 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 KAT8Q9H7Z6 458 aaKnown RBP13.84□□□□□ -0.19
COL4A3-202ENST00000396578 MKLN1Q9UL63 735 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 TISP43B9A030 160 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 BLMHQ13867 455 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 GTF2H2Q13888 395 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 ACAP2Q15057 778 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 CNPY1Q3B7I2 92 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 GTF2H2CQ6P1K8 395 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 SDR16C5Q8N3Y7 309 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 P2RY11Q96G91 374 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 IMP3Q9NV31 184 aaKnown RBP13.84□□□□□ -0.19
COL4A3-202ENST00000396578 MIOSQ9NXC5 875 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 COLEC10Q9Y6Z7 277 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 DIP2AQ14689 1571 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 TBX1O43435 398 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 CD2P06729 351 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 PCSK2P16519 638 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 ACSL1P33121 698 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 TPTEP56180 551 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 MRPS5P82675 430 aaKnown RBP13.84□□□□□ -0.19
COL4A3-202ENST00000396578 CES5AQ6NT32 575 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 PIGZQ86VD9 579 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 SLC30A8Q8IWU4 369 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 ACO2Q99798 780 aaKnown RBP13.84□□□□□ -0.19
COL4A3-202ENST00000396578 CORO1BQ9BR76 489 aa13.84□□□□□ -0.19
COL4A3-202ENST00000396578 TCRBV5S4A2TA0A5A2 114 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 PDHXO00330 501 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 SLC22A1O15245 554 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 AQP4P55087 323 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 DGLUCYQ7Z3D6 616 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 PWWP2AQ96N64 755 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 AGO3Q9H9G7 860 aaKnown RBP13.83□□□□□ -0.19
COL4A3-202ENST00000396578 M0R036 132 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 PRKD3O94806 890 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 ADRB2P07550 413 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 CYP3A4P08684 503 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 DCDC1P59894 354 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 RPL6Q02878 288 aaKnown RBP13.83□□□□□ -0.19
COL4A3-202ENST00000396578 CERCAMQ5T4B2 595 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 IQSEC1Q6DN90 963 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 RHBDF2Q6PJF5 856 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 CADM2Q8N3J6 435 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 DPF3Q92784 378 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 MFSD1Q9H3U5 465 aa13.83□□□□□ -0.19
COL4A3-202ENST00000396578 C5orf60A6NFR6 353 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 ZSCAN5BA6NJL1 495 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 WNT3AP56704 352 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 TMEM44Q2T9K0 475 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 SMARCD3Q6STE5 483 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 DENND6BQ8NEG7 585 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 SGCDQ92629 289 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 ZFP3Q96NJ6 502 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 ZNF99A8MXY4 864 aaPredicted RBP13.83□□□□□ -0.2
COL4A3-202ENST00000396578 SP140Q13342 867 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 EIF5AL1Q6IS14 154 aaKnown RBP13.83□□□□□ -0.2
COL4A3-202ENST00000396578 C12orf29Q8N999 325 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 AGAP2Q99490 1192 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 FEM1AQ9BSK4 669 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 DUSP16Q9BY84 665 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 ATG10Q9H0Y0 220 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 EMC3Q9P0I2 261 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 TMEM5Q9Y2B1 443 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 CLPXO76031 633 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 SCELO95171 688 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 C2P06681 752 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 NT5EP21589 574 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 TAS2R40P59535 323 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 S100A12P80511 92 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 VLDLRP98155 873 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 PLA2G4EQ3MJ16 856 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 FAM76BQ5HYJ3 339 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 STYXQ8WUJ0 223 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 ZSWIM3Q96MP5 696 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 CCDC86Q9H6F5 360 aaKnown RBP13.83□□□□□ -0.2
COL4A3-202ENST00000396578 NUDT4Q9NZJ9 180 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 RGL2O15211 777 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 DPEP1P16444 411 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 ILDR1Q86SU0 546 aaPredicted RBP13.83□□□□□ -0.2
COL4A3-202ENST00000396578 TMEM17Q86X19 198 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 ZBTB2Q8N680 514 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 LRRN4Q8WUT4 740 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 MKL1Q969V6 931 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 ZNF69Q9UC07 566 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 L7N2F9 121 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 PER2O15055 1255 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 PGLSO95336 258 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 SLC2A2P11168 524 aaPredicted RBP13.83□□□□□ -0.2
COL4A3-202ENST00000396578 VAMP2P63027 116 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 BNIP1Q12981 228 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 IKBKEQ14164 716 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 UBAP2Q5T6F2 1119 aaKnown RBP13.83□□□□□ -0.2
COL4A3-202ENST00000396578 CLEC6AQ6EIG7 209 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL4A3-202ENST00000396578 GBA3Q9H227 469 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms