RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 FTCDO95954 541 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 LIFP15018 202 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 AMD1P17707 334 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 LPOP22079 712 aaPredicted RBP17.96■□□□□ 0.47
FXN-203ENST00000396366 PBLDP30039 288 aaPredicted RBP17.96■□□□□ 0.47
FXN-203ENST00000396366 SEPHS1P49903 392 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 TMPRSS15P98073 1019 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 NFE2L1Q14494 772 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 TAF1AQ15573 450 aaPredicted RBP17.96■□□□□ 0.47
FXN-203ENST00000396366 PEX26Q7Z412 305 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 ZNF605Q86T29 641 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 PLXDC1Q8IUK5 500 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 CACNA2D3Q8IZS8 1091 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 IL22RA1Q8N6P7 574 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 AVL9Q8NBF6 648 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 SPC24Q8NBT2 197 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 OR13C4Q8NGS5 318 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 CXorf40BQ96DE9 158 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 C9orf72Q96LT7 481 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 SPATA13Q96N96 652 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 EPB41L1Q9H4G0 881 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 FAM96AQ9H5X1 160 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.96■□□□□ 0.47
FXN-203ENST00000396366 PILRAQ9UKJ1 303 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 AMFRQ9UKV5 643 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 R3HDM2Q9Y2K5 976 aaKnown RBP17.96■□□□□ 0.47
FXN-203ENST00000396366 AAR2Q9Y312 384 aaKnown RBP17.96■□□□□ 0.47
FXN-203ENST00000396366 ZNF106Q9H2Y7 1883 aaKnown RBP17.96■□□□□ 0.47
FXN-203ENST00000396366 MN1Q10571 1320 aaPredicted RBP17.96■□□□□ 0.46
FXN-203ENST00000396366 TCRBV7S2A1N4TA0A589 114 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 CCL22O00626 93 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 RAD1O60671 282 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 PPFIA2O75334 1257 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 C9P02748 559 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 VCLP18206 1134 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 AKT1P31749 480 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 RAB15P59190 212 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 PPP1CAP62136 330 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 XIAPP98170 497 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 ITGA9Q13797 1035 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 PRPSAP1Q14558 356 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 FNBP1LQ5T0N5 605 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 TIPARPQ7Z3E1 657 aaKnown RBP17.95■□□□□ 0.46
FXN-203ENST00000396366 FAM71DQ8N9W8 422 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 GPR150Q8NGU9 434 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 MED8Q96G25 268 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 TBL1YQ9BQ87 522 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 FERMT1Q9BQL6 677 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 ASB8Q9H765 288 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 FBXO8Q9NRD0 319 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 POT1Q9NUX5 634 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 FAM8A1Q9UBU6 413 aa17.95■□□□□ 0.46
FXN-203ENST00000396366 TENM4Q6N022 2769 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 C2orf81A6NN90 581 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 SRP72O76094 671 aaKnown RBP17.94■□□□□ 0.46
FXN-203ENST00000396366 STK10O94804 968 aaKnown RBP17.94■□□□□ 0.46
FXN-203ENST00000396366 METTL18O95568 372 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 PLA2G2AP14555 144 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 MSH3P20585 1137 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 CETN2P41208 172 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 ATP1A2P50993 1020 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 SH3BP2P78314 561 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 DMPKQ09013 629 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 RPE65Q16518 533 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 TBR1Q16650 682 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 XKR5Q6UX68 686 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 FAM92BQ6ZTR7 304 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 UNC5BQ8IZJ1 945 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 TAB3Q8N5C8 712 aaPredicted RBP17.94■□□□□ 0.46
FXN-203ENST00000396366 ZSCAN1Q8NBB4 408 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 SLC12A9Q9BXP2 914 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 ZCCHC2Q9C0B9 1178 aaKnown RBP17.94■□□□□ 0.46
FXN-203ENST00000396366 SMOXQ9NWM0 555 aa17.94■□□□□ 0.46
FXN-203ENST00000396366 SIDT1Q9NXL6 827 aaKnown RBP17.94■□□□□ 0.46
FXN-203ENST00000396366 CFAP20Q9Y6A4 193 aaKnown RBP17.94■□□□□ 0.46
FXN-203ENST00000396366 COL6A6A6NMZ7 2263 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 C5orf60A6NFR6 353 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 POLR1CO15160 346 aaPredicted RBP17.93■□□□□ 0.46
FXN-203ENST00000396366 SGTAO43765 313 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 KCNJ13O60928 360 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 ZIC2O95409 532 aaPredicted RBP17.93■□□□□ 0.46
FXN-203ENST00000396366 ANKRD34CP0C6C1 535 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 FAM87AP0C7U9 286 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 TPH1P17752 444 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 HALP42357 657 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 GDF10P55107 478 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 FOXM1Q08050 763 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 KIF5AQ12840 1032 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 METRNLQ641Q3 311 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 CEACAM20Q6UY09 585 aa17.93■□□□□ 0.46
FXN-203ENST00000396366 TEFMQ96QE5 360 aaKnown RBP17.93■□□□□ 0.46
FXN-203ENST00000396366 INSM2Q96T92 566 aaPredicted RBP17.93■□□□□ 0.46
FXN-203ENST00000396366 DNMT3AQ9Y6K1 912 aaPredicted RBP17.93■□□□□ 0.46
FXN-203ENST00000396366 LOC101059948A0A1B0GTJ6 334 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 LDB2O43679 373 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 RASSF9O75901 435 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 STK17BO94768 372 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 CRTAMO95727 393 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 ITGB2P05107 769 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 PTMAP06454 111 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms