RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SLC6A2P23975 617 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 CHN2P52757 468 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 TLR1Q15399 786 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 C6orf136Q5SQH8 315 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 GPRC6AQ5T6X5 926 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 LETMD1Q6P1Q0 360 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 TPGS1Q6ZTW0 290 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 ZSWIM9Q86XI8 627 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 MYO1HQ8N1T3 1032 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 PHC3Q8NDX5 983 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 OR52B6Q8NGF0 335 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 OR2T34Q8NGX1 318 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 OR2T3Q8NH03 318 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 LKAAEAR1Q8TD35 194 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 ECHDC3Q96DC8 303 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 ACOX2Q99424 681 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 NOL11Q9H8H0 719 aaKnown RBP16.56■□□□□ 0.24
NUP50-202ENST00000396096 HEBP1Q9NRV9 189 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 ARMC1Q9NVT9 282 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 CMTM6Q9NX76 183 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 PLK2Q9NYY3 685 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 PCDHA9Q9Y5H5 950 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 PLXNB3Q9ULL4 1909 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 GRXCR2A6NFK2 248 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 AQP12BA6NM10 295 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 OR7A17O14581 309 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 SLC22A3O75751 556 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 FGF18O76093 207 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 SRCP12931 536 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 GKP32189 559 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 KCNK10P57789 538 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 SNRPD1P62314 119 aaKnown RBP16.55■□□□□ 0.24
NUP50-202ENST00000396096 GTF2H2Q13888 395 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 CHRNA6Q15825 494 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 PITRM1Q5JRX3 1037 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 GTF2H2CQ6P1K8 395 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 METTL2BQ6P1Q9 378 aaKnown RBP16.55■□□□□ 0.24
NUP50-202ENST00000396096 RNF165Q6ZSG1 346 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 Q6ZSR9 355 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 AQP12AQ8IXF9 295 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 ST13P4Q8IZP2 240 aaPredicted RBP16.55■□□□□ 0.24
NUP50-202ENST00000396096 NXPE1Q8N323 547 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 CDYL2Q8N8U2 506 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 DIS3LQ8TF46 1054 aaKnown RBP16.55■□□□□ 0.24
NUP50-202ENST00000396096 UBTD2Q8WUN7 234 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 EFHD1Q9BUP0 239 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 FAM126AQ9BYI3 521 aaPredicted RBP16.55■□□□□ 0.24
NUP50-202ENST00000396096 TRIM15Q9C019 465 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 TNKS2Q9H2K2 1166 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 MUC13Q9H3R2 512 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 KLHL42Q9P2K6 505 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 SUFUQ9UMX1 484 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 HS3ST2Q9Y278 367 aa16.55■□□□□ 0.24
NUP50-202ENST00000396096 DYTNA2CJ06 578 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 FAM234BA2RU67 622 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 ASPDHA6ND91 283 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 NRG2O14511 850 aaPredicted RBP16.54■□□□□ 0.24
NUP50-202ENST00000396096 TXNDC9O14530 226 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 SLC25A14O95258 325 aaPredicted RBP16.54■□□□□ 0.24
NUP50-202ENST00000396096 TIMP1P01033 207 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 BMP1P13497 986 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 ZNF26P17031 533 aaPredicted RBP16.54■□□□□ 0.24
NUP50-202ENST00000396096 ATP6V1B2P21281 511 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 RNF220Q5VTB9 566 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 LCN8Q6JVE9 175 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 ZBTB2Q8N680 514 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 TEX37Q96LM6 180 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 YME1L1Q96TA2 773 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 C17orf80Q9BSJ5 609 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 CRLS1Q9UJA2 301 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 LEF1Q9UJU2 399 aaPredicted RBP16.54■□□□□ 0.24
NUP50-202ENST00000396096 AP4B1Q9Y6B7 739 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 TAPBPO15533 448 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 OTCP00480 354 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 NPPAP01160 153 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 C8AP07357 584 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 CAPN1P07384 714 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 CSF2RAP15509 400 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 UGT1A6P19224 532 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 UGT1A1P22309 533 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 UGT1A4P22310 534 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 UGT1A3P35503 534 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 UGT1A5P35504 534 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 POLR2JP52435 117 aaKnown RBP16.54■□□□□ 0.24
NUP50-202ENST00000396096 EMX2Q04743 252 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 TRAF3Q13114 568 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 MYLK3Q32MK0 819 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 ATP6AP1LQ52LC2 224 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 FOXB2Q5VYV0 432 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 CRTC1Q6UUV9 634 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 CYP2R1Q6VVX0 501 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 TPRG1Q6ZUI0 275 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 HOMEZQ8IX15 550 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 ELMOD1Q8N336 334 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 TMEM199Q8N511 208 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 METTL6Q8TCB7 284 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 LRTOMTQ8WZ04 291 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 TMEM125Q96AQ2 219 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 SCRN2Q96FV2 425 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 MCCC1Q96RQ3 725 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms