RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TCEA1P23193 301 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 PRPH2P23942 346 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 BMP8BP34820 402 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 HMGCLP35914 325 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 STC1P52823 247 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 ATP6V0D1P61421 351 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 ESRRGP62508 458 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 GRSF1Q12849 480 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS41-203ENST00000395969 KLF10Q13118 480 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PTK2BQ14289 1009 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 OCLNQ16625 522 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 GPR33Q49SQ1 333 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 FASTKD1Q53R41 847 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 NHSL2Q5HYW2 709 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 LIPMQ5VYY2 423 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 FAM117BQ6P1L5 589 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 XKR5Q6UX68 686 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 C16orf89Q6UX73 402 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 MACC1Q6ZN28 852 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 ARHGAP36Q6ZRI8 547 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PIWIL4Q7Z3Z4 852 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 ZNF354CQ86Y25 554 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 IQCF2Q8IXL9 164 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 FBXO15Q8NCQ5 510 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 PIH1D2Q8WWB5 315 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 METTL2AQ96IZ6 378 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 VPS35Q96QK1 796 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 FEM1AQ9BSK4 669 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 SLC7A5P2Q9GIP4 190 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 CAAP1Q9H8G2 361 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 C10orf88Q9H8K7 445 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 ZNF334Q9HCZ1 680 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 ERVK-11Q9UQG0 969 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 MED16Q9Y2X0 877 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 LOC100653049A0A140TA62 436 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 SLC12A8A0AV02 714 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 LCHNA4D1U4 455 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 CFAP99D6REC4 459 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 H0Y858 1186 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 TPP1O14773 563 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 SLC16A5O15375 505 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 MSI1O43347 362 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 KRT34O76011 436 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 CNTN5O94779 1100 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PGLSO95336 258 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 AHSGP02765 367 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 RBP1P09455 135 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 OR4Q2P0C623 313 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 NMBRP28336 390 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 ARRB2P32121 409 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 OR1D2P34982 312 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 GGT5P36269 586 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 GATMP50440 423 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 CDH15P55291 814 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 FPGSQ05932 587 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 SLC10A7Q0GE19 358 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 CEACAM7Q14002 265 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 NR1D2Q14995 579 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 SETMARQ53H47 684 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 FSCBQ5H9T9 825 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 FGD3Q5JSP0 725 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 AARS2Q5JTZ9 985 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 C10orf120Q5SQS8 335 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 GDPD4Q6W3E5 623 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PRR23BQ6ZRT6 265 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 CYP2U1Q7Z449 544 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 DCLK2Q8N568 766 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 SLC15A4Q8N697 577 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PCDH20Q8N6Y1 951 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 Q8N9G6 341 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 BHLHE22Q8NFJ8 381 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 SPPL3Q8TCT6 385 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 HEXDCQ8WVB3 486 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 LPGAT1Q92604 370 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 KCNJ9Q92806 393 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 TAMM41Q96BW9 452 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 MYEOVQ96EZ4 313 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 MAGEB10Q96LZ2 347 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 CCDC138Q96M89 665 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 HHIPQ96QV1 700 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 UHRF1Q96T88 793 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 OMDQ99983 421 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 TMEM79Q9BSE2 394 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 SLC13A1Q9BZW2 595 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 RNF38Q9H0F5 515 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 TASP1Q9H6P5 420 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 COQ10BQ9H8M1 238 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 MEAF6Q9HAF1 191 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 POLR3BQ9NW08 1133 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 DUS2Q9NX74 493 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 TMEM9Q9P0T7 183 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 UBA2Q9UBT2 640 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 RAP2CQ9Y3L5 183 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 AP4S1Q9Y587 144 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 TRAV19A0A0A6YYK7 116 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 A0A1W2PPW3 197 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PLOD2O00469 737 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 KPNA4O00629 521 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 GAPDHSO14556 408 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 MUSKO15146 869 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms