RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SEPT7Q16181 437 aaKnown RBP16.27■□□□□ 0.2
CXCL1-201ENST00000395761 ANKRD20A4Q4UJ75 823 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 BCL7AQ4VC05 210 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 XKR5Q6UX68 686 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 IGDCC3Q8IVU1 814 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 SLC37A2Q8TED4 501 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 NAT6Q93015 286 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 CCDC3Q9BQI4 270 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 RHOXF2Q9BQY4 288 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 FAM129AQ9BZQ8 928 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 DPH5Q9H2P9 285 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 FAM114A2Q9NRY5 505 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 CATSPERZQ9NTU4 200 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 GRHL1Q9NZI5 618 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 SAMD15Q9P1V8 674 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 LRIT1Q9P2V4 623 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 ANAPC5Q9UJX4 755 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 KLK13Q9UKR3 277 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 FAM149AA5PLN7 773 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 CDK4P11802 303 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 F3P13726 295 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 GLB1P16278 677 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 IDSP22304 550 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 RPL10P27635 214 aaKnown RBP16.26■□□□□ 0.19
CXCL1-201ENST00000395761 PRLHRP49683 370 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 CAV1Q03135 178 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 CBLBQ13191 982 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 ITIH4Q14624 930 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 BBS9Q3SYG4 887 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 HP1BP3Q5SSJ5 553 aaPredicted RBP16.26■□□□□ 0.19
CXCL1-201ENST00000395761 ARMC3Q5W041 872 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 KIAA0930Q6ICG6 404 aaPredicted RBP16.26■□□□□ 0.19
CXCL1-201ENST00000395761 TMEM135Q86UB9 458 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 IFT20Q8IY31 132 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 SFRP1Q8N474 314 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 Q8N9G6 341 aaPredicted RBP16.26■□□□□ 0.19
CXCL1-201ENST00000395761 EIF1ADQ8N9N8 165 aaKnown RBP16.26■□□□□ 0.19
CXCL1-201ENST00000395761 MAPK15Q8TD08 544 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 ART4Q93070 314 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.26■□□□□ 0.19
CXCL1-201ENST00000395761 ZNF669Q96BR6 464 aaPredicted RBP16.26■□□□□ 0.19
CXCL1-201ENST00000395761 STAMBPL1Q96FJ0 436 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 SCNM1Q9BWG6 230 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 IL1RAPL1Q9NZN1 696 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 FAM8A1Q9UBU6 413 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 WDR37Q9Y2I8 494 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 RPS6KL1Q9Y6S9 549 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 SPEGQ15772 3267 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 ASXL3Q9C0F0 2248 aa16.26■□□□□ 0.19
CXCL1-201ENST00000395761 ZCWPW2A0A1B0GU75 182 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 MGAT4DA6NG13 374 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 PDZK1P1A8MUH7 402 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 NUDT21O43809 227 aaKnown RBP16.25■□□□□ 0.19
CXCL1-201ENST00000395761 KCNJ13O60928 360 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 BRAFP15056 766 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 VCLP18206 1134 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 NSG1P42857 185 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 CCL7P80098 99 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 DMPKQ09013 629 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 CALCOCO2Q13137 446 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 TRADDQ15628 312 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 HES3Q5TGS1 186 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 LYPLAL1Q5VWZ2 237 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 PACS1Q6VY07 963 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 CERS6Q6ZMG9 384 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 TMPRSS7Q7RTY8 843 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 LILRA3Q8N6C8 439 aaPredicted RBP16.25■□□□□ 0.19
CXCL1-201ENST00000395761 OR6C4Q8NGE1 309 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 OR2L2Q8NH16 312 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 LINC00615Q96LM1 132 aaPredicted RBP16.25■□□□□ 0.19
CXCL1-201ENST00000395761 ABCG4Q9H172 646 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 ANKZF1Q9H8Y5 726 aa16.25■□□□□ 0.19
CXCL1-201ENST00000395761 ZFC3H1O60293 1989 aaKnown RBP16.24■□□□□ 0.19
CXCL1-201ENST00000395761 PRAMEF33A0A0G2JMD5 474 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 RHPN2P1A8MT19 583 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 B4GAT1O43505 415 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 AP2A2O94973 939 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 OR1D5P58170 312 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 CUL1Q13616 776 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 CLCA4Q14CN2 919 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 ERCC6LQ2NKX8 1250 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 ZNF658BQ4V348 819 aaPredicted RBP16.24■□□□□ 0.19
CXCL1-201ENST00000395761 DNAJC21Q5F1R6 531 aaKnown RBP16.24■□□□□ 0.19
CXCL1-201ENST00000395761 AGAP9Q5VTM2 703 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 METRNLQ641Q3 311 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 ABRAXAS1Q6UWZ7 409 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 WASH2PQ6VEQ5 465 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 ZNF438Q7Z4V0 828 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 ZNF761Q86XN6 746 aaPredicted RBP16.24■□□□□ 0.19
CXCL1-201ENST00000395761 CFAP206Q8IYR0 622 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 UNC5BQ8IZJ1 945 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 PDIK1LQ8N165 341 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 EBNA1BP2Q99848 306 aaKnown RBP16.24■□□□□ 0.19
CXCL1-201ENST00000395761 WDR83Q9BRX9 315 aaKnown RBP16.24■□□□□ 0.19
CXCL1-201ENST00000395761 CCM2Q9BSQ5 444 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 WASH6PQ9NQA3 447 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 ZNF624Q9P2J8 865 aaPredicted RBP16.24■□□□□ 0.19
CXCL1-201ENST00000395761 PSMD13Q9UNM6 376 aa16.24■□□□□ 0.19
CXCL1-201ENST00000395761 KIR2DS5A0A0G2JLQ3 304 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 A0A0G2JNG1 304 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms