RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 STK40Q8N2I9 435 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 GPR26Q8NDV2 337 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 RAD9AQ99638 391 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 IL23AQ9NPF7 189 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 DNMT3BQ9UBC3 853 aaKnown RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 STK25O00506 426 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 POP4O95707 220 aaKnown RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 EPOP01588 193 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 EEF1B2P24534 225 aaKnown RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 GPR1P46091 355 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 SLC5A9Q2M3M2 681 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 FBXO46Q6PJ61 603 aaPredicted RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 CFAP206Q8IYR0 622 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 ZBTB2Q8N680 514 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 SLC25A23Q9BV35 468 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 TTLL2Q9BWV7 592 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 SLC28A3Q9HAS3 691 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 HPS4Q9NQG7 708 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 INTS6Q9UL03 887 aaKnown RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 A0A088AWK7 358 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 GNG14A0A1W2PPG7 69 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 SAP18O00422 153 aaKnown RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 UBFD1O14562 309 aaKnown RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 GBAP04062 536 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 ANXA5P08758 320 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 MTHFD1P11586 935 aaKnown RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 AOC1P19801 751 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 OGNP20774 298 aaKnown RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 PSMD8P48556 350 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 ATP6V0D1P61421 351 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 UFM1P61960 85 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 IRF8Q02556 426 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 PHKG1Q16816 387 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 CYP51A1Q16850 503 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 CARD16Q5EG05 197 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 RABL3Q5HYI8 236 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 NET1Q7Z628 596 aaPredicted RBP15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 CYGBQ8WWM9 190 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 MKS1Q9NXB0 559 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 ASB1Q9Y576 335 aa15.69■□□□□ 0.1
SMARCD1-202ENST00000394963 CHD7Q9P2D1 2997 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 TRAFD1O14545 582 aaPredicted RBP15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 TRBC1P01850 177 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 RIPK1Q13546 671 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 REP15Q6BDI9 236 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 CLEC14AQ86T13 490 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 RNF175Q8N4F7 328 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 LKAAEAR1Q8TD35 194 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 APOLD1Q96LR9 279 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 ZNF570Q96NI8 536 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 TOX2Q96NM4 488 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 SIKE1Q9BRV8 207 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 DPY30Q9C005 99 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 SPHK2Q9NRA0 654 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 SH3BP4Q9P0V3 963 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 SPASTQ9UBP0 616 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 ZNF490Q9ULM2 529 aaPredicted RBP15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 RPL10P27635 214 aaKnown RBP15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 BMPR1AP36894 532 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 NAE1Q13564 534 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 GTF2H2Q13888 395 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 MTX3Q5HYI7 312 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 TBCELQ5QJ74 424 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 GRAMD4Q6IC98 578 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 CAPRIN2Q6IMN6 1127 aaKnown RBP15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 GTF2H2CQ6P1K8 395 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 ADAMTSL2Q86TH1 951 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 FOPNLQ96NB1 174 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 ZNF184Q99676 751 aaPredicted RBP15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 CIB1Q99828 191 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 ARNT2Q9HBZ2 717 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 IL17CQ9P0M4 197 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 IKZF3Q9UKT9 509 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 SLC22A14Q9Y267 594 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 ASCC3Q8N3C0 2202 aaKnown RBP15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 XIRP2A4UGR9 3374 aa15.68■□□□□ 0.1
SMARCD1-202ENST00000394963 ANTXRLA6NF34 631 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 NRG2O14511 850 aaPredicted RBP15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 PAPSS2O95340 614 aaPredicted RBP15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 ESR1P03372 595 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 ZDHHC11BP0C7U3 371 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 MTPNP58546 118 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 MTA1Q13330 715 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 RFTN1Q14699 578 aaPredicted RBP15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 GRIN2CQ14957 1233 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 SF1Q15637 639 aaKnown RBP15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 GDPD4Q6W3E5 623 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 OR4F6Q8NGB9 312 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 FBXO30Q8TB52 745 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 RNF145Q96MT1 663 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 HEPHQ9BQS7 1158 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 RTKNQ9BST9 563 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 PCDH12Q9NPG4 1184 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 FARSBQ9NSD9 589 aaKnown RBP15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 LHX3Q9UBR4 397 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 MROH6A6NGR9 719 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 MMP20O60882 483 aa15.67■□□□□ 0.1
SMARCD1-202ENST00000394963 CEBPBP17676 345 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms