RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 RPN2P04844 631 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 HTR1BP28222 390 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 ATP12AP54707 1039 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 RUNX1T1Q06455 604 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 CHIT1Q13231 466 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 GPR107Q5VW38 600 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 LRRC66Q68CR7 880 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 ZYG11AQ6WRX3 759 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 TRIM69Q86WT6 500 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 SPNS2Q8IVW8 549 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 MREGQ8N565 214 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 SLC25A51Q9H1U9 297 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 EPB41L1Q9H4G0 881 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 C11orf16Q9NQ32 467 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 DNAJC28Q9NX36 388 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 SLC22A14Q9Y267 594 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 PHIPQ8WWQ0 1821 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 LAMB1P07942 1786 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 TTC34A8MYJ7 566 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 GTPBP1O00178 669 aaKnown RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 OR6B1O95007 311 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 CFIP05156 583 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 DPYSL2Q16555 572 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 LPAL2Q16609 132 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 PAGE2BQ5JRK9 111 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 RTP2Q5QGT7 225 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 CST9Q5W186 159 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 APCDD1Q8J025 514 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 FBXW8Q8N3Y1 598 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 OR9I1Q8NGQ6 314 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 MAGEC3Q8TD91 643 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 TLR9Q9NR96 1032 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 ZDHHC18Q9NUE0 388 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 GGA2Q9UJY4 613 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 ONECUT3O60422 494 aaPredicted RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 SCN2BO60939 215 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 TGM3Q08188 693 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 MAD2L1Q13257 205 aaPredicted RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 PCBP1Q15365 356 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDH11-202ENST00000394156 FAM20CQ8IXL6 584 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 DCAKDQ8WVC6 231 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 SMPDL3BQ92485 455 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 HERPUD2Q9BSE4 406 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 LRTM1Q9HBL6 345 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 BLOC1S6Q9UL45 172 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 SAMHD1Q9Y3Z3 626 aaKnown RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 COL2A1P02458 1487 aaPredicted RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 CPSF4LA6NMK7 179 aaKnown RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 LEFTY2O00292 366 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 PRMT5O14744 637 aaPredicted RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 INMTO95050 263 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 MATN4O95460 622 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 TPSB2P20231 275 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 KLF10Q13118 480 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 TPSAB1Q15661 275 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 GALNT13Q8IUC8 556 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 LMO3Q8TAP4 145 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 PPP1R14AQ96A00 147 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 OR52B2Q96RD2 323 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 FAM83DQ9H4H8 585 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 SLC28A1O00337 649 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 GPR39O43194 453 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 SERPINB10P48595 397 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 DEFB103AP81534 67 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 SIM2Q14190 667 aaPredicted RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 ZSWIM7Q19AV6 140 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 LY6G5CQ5SRR4 150 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 POTEHQ6S545 545 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 R3HCC1LQ7Z5L2 792 aaKnown RBP9.01□□□□□ -0.97
CDH11-202ENST00000394156 CADM2Q8N3J6 435 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 POMGNT2Q8NAT1 580 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 BORCS6Q96GS4 357 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 HEPHQ9BQS7 1158 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 SLC25A23Q9BV35 468 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 XYLT2Q9H1B5 865 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 TMEM245Q9H330 911 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 GJD2Q9UKL4 321 aa9.01□□□□□ -0.97
CDH11-202ENST00000394156 KIAA1217Q5T5P2 1943 aa9□□□□□ -0.97
CDH11-202ENST00000394156 PRR23D1E9PI22 279 aaPredicted RBP9□□□□□ -0.97
CDH11-202ENST00000394156 GSC2O15499 205 aa9□□□□□ -0.97
CDH11-202ENST00000394156 VIPP01282 170 aa9□□□□□ -0.97
CDH11-202ENST00000394156 OPN1SWP03999 348 aa9□□□□□ -0.97
CDH11-202ENST00000394156 ABHD2P08910 425 aa9□□□□□ -0.97
CDH11-202ENST00000394156 PRR23D2P0DMB1 279 aaPredicted RBP9□□□□□ -0.97
CDH11-202ENST00000394156 HAPLN1P10915 354 aaPredicted RBP9□□□□□ -0.97
CDH11-202ENST00000394156 TNFAIP8L2Q6P589 184 aaPredicted RBP9□□□□□ -0.97
CDH11-202ENST00000394156 LRRTM3Q86VH5 581 aa9□□□□□ -0.97
CDH11-202ENST00000394156 PQLC3Q8N755 202 aa9□□□□□ -0.97
CDH11-202ENST00000394156 REPS1Q96D71 796 aa9□□□□□ -0.97
CDH11-202ENST00000394156 NSUN5Q96P11 429 aaKnown RBP9□□□□□ -0.97
CDH11-202ENST00000394156 ST6GALNAC4Q9H4F1 302 aa9□□□□□ -0.97
CDH11-202ENST00000394156 PALMDQ9NP74 551 aa9□□□□□ -0.97
CDH11-202ENST00000394156 MRPS7Q9Y2R9 242 aaKnown RBP9□□□□□ -0.97
CDH11-202ENST00000394156 CPED1A4D0V7 1026 aa9□□□□□ -0.97
CDH11-202ENST00000394156 FCER2P06734 321 aa9□□□□□ -0.97
CDH11-202ENST00000394156 SAMD4BQ5PRF9 694 aaKnown RBP9□□□□□ -0.97
CDH11-202ENST00000394156 ANO7Q6IWH7 933 aa9□□□□□ -0.97
CDH11-202ENST00000394156 GDPD4Q6W3E5 623 aa9□□□□□ -0.97
CDH11-202ENST00000394156 CLYBLQ8N0X4 340 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms