RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 LRRC14BA6NHZ5 514 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 K7ESM1 405 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 FCHO1O14526 889 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 AP2A2O94973 939 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 SNUPNO95149 360 aaKnown RBP8.51□□□□□ -1.05
TDP1-203ENST00000393454 HOXB2P14652 356 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 DRD1P21728 446 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 EEF1DP29692 281 aaKnown RBP8.51□□□□□ -1.05
TDP1-203ENST00000393454 DRD3P35462 400 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 RGS19P49795 217 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 ALDH18A1P54886 795 aaKnown RBP8.51□□□□□ -1.05
TDP1-203ENST00000393454 CDH13P55290 713 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 RPS14P62263 151 aaKnown RBP8.51□□□□□ -1.05
TDP1-203ENST00000393454 TMEM115Q12893 351 aaPredicted RBP8.51□□□□□ -1.05
TDP1-203ENST00000393454 TMEM196Q5HYL7 178 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 SEL1L3Q68CR1 1132 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 FRMD7Q6ZUT3 714 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 MAVSQ7Z434 540 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 ADAMTSL2Q86TH1 951 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 CUZD1Q86UP6 607 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 PHYKPLQ8IUZ5 450 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 RAVER1Q8IY67 606 aaKnown RBP8.51□□□□□ -1.05
TDP1-203ENST00000393454 AFAP1L2Q8N4X5 818 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 BEND7Q8N7W2 519 aaPredicted RBP8.51□□□□□ -1.05
TDP1-203ENST00000393454 IL17RCQ8NAC3 791 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 DDHD1Q8NEL9 900 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 ELMO1Q92556 727 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 SKA1Q96BD8 255 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 VPS35Q96QK1 796 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 PHF7Q9BWX1 381 aaPredicted RBP8.51□□□□□ -1.05
TDP1-203ENST00000393454 GSTO2Q9H4Y5 243 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 DNAJC28Q9NX36 388 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 VTI1BQ9UEU0 232 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 TMCO1Q9UM00 188 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.51□□□□□ -1.05
TDP1-203ENST00000393454 UNC80Q8N2C7 3258 aa8.51□□□□□ -1.05
TDP1-203ENST00000393454 CCDC189A1A4V9 331 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 PRR23AA6NEV1 266 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 IGLON5A6NGN9 336 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TMEM233B4DJY2 109 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 SLCO1B7G3V0H7 640 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 RAD51BO15315 384 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 HDAC3O15379 428 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TSPAN6O43657 245 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 NARSO43776 548 aaKnown RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 CCDC22O60826 627 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 GUCA1CO95843 209 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 FTH1P02794 183 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 DNTTP04053 509 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 CBSLP0DN79 551 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 AOAHP28039 575 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 CBSP35520 551 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 SCTRP47872 440 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 AGTR2P50052 363 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 HK3P52790 923 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TGFBIQ15582 683 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 PDCD2Q16342 344 aaPredicted RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 CRY1Q16526 586 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 GALNTL6Q49A17 601 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 SLC9B1Q4ZJI4 515 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 IER5LQ5T953 404 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 AGBL4Q5VU57 503 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 ANKS6Q68DC2 871 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TMEM220Q6QAJ8 160 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 EPGNQ6UW88 154 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 ZNF765Q7L2R6 523 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TRMT11Q7Z4G4 463 aaKnown RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 CLNKQ7Z7G1 428 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TRIM74Q86UV6 250 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 PELI3Q8N2H9 469 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 RASGEF1AQ8N9B8 481 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TRPC4APQ8TEL6 797 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 DNASE1L2Q92874 299 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 ESAMQ96AP7 390 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 PRR11Q96HE9 360 aaPredicted RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 EGFL8Q99944 293 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TRMOQ9BU70 441 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 NUF2Q9BZD4 464 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 SLC6A17Q9H1V8 727 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 STN1Q9H668 368 aaKnown RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 ACTR5Q9H9F9 607 aaPredicted RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 TRPV5Q9NQA5 729 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 FBXL12Q9NXK8 326 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 NUDT4Q9NZJ9 180 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 SERGEFQ9UGK8 458 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 ADAMTS6Q9UKP5 1117 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 SPTBN5Q9NRC6 3674 aaKnown RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 GOLGA8QA0A0J9YX86 632 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 GOLGA8OA6NCC3 632 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 GOLGA8NF8WBI6 632 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 MATN2O00339 956 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 QSOX1O00391 747 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 ZNF195O14628 629 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 KPNA5O15131 536 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 GRID2O43424 1007 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 ADAM23O75077 832 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 ATG13O75143 517 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TM7SF2O76062 418 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 PCCBP05166 539 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 ALOX15P16050 662 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms