RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 FAM120BQ96EK7 910 aaKnown RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 SLC45A3Q96JT2 553 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 MRM3Q9HC36 420 aaKnown RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 FAIMQ9NVQ4 179 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 CFAP97Q9P2B7 532 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 KIF17Q9P2E2 1029 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 RABL2AQ9UBK7 228 aaPredicted RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 SRRDQ9UH36 339 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 TNPO3Q9Y5L0 923 aaKnown RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 LINC00854A0A1B0GVQ3 168 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 TMEM88BA6NKF7 163 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 GPR39O43194 453 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 KRT6AP02538 564 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 KRT6BP04259 564 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 KRT6CP48668 564 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 LIPEQ05469 1076 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 VAC14Q08AM6 782 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 UNC50Q53HI1 259 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 GALNT18Q6P9A2 607 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 SERPINA9Q86WD7 417 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 CENPSQ8N2Z9 138 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 ASB9Q96DX5 294 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 MED8Q96G25 268 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 DHRS1Q96LJ7 313 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 BTBD9Q96Q07 612 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 TCF12Q99081 682 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 TREX1Q9NSU2 369 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 EVPLLA8MZ36 301 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 MYO1DO94832 1006 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 PAPSS2O95340 614 aaPredicted RBP10.41□□□□□ -0.74
CALD1-203ENST00000393118 GALTP07902 379 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 SLC10A3P09131 477 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 POLR2JP52435 117 aaKnown RBP10.41□□□□□ -0.74
CALD1-203ENST00000393118 SH3BP2P78314 561 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 HERC3Q15034 1050 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 OR4D1Q15615 310 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 MAPKAPK3Q16644 382 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 PABPC1LQ4VXU2 614 aaKnown RBP10.41□□□□□ -0.74
CALD1-203ENST00000393118 FAM219BQ5XKK7 198 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 ATG14Q6ZNE5 492 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 ITIH5Q86UX2 942 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 ZNF555Q8NEP9 628 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 HOPXQ9BPY8 73 aaPredicted RBP10.41□□□□□ -0.74
CALD1-203ENST00000393118 BDH2Q9BUT1 245 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 C9orf16Q9BUW7 83 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 ASPSCR1Q9BZE9 553 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 TFB2MQ9H5Q4 396 aaKnown RBP10.41□□□□□ -0.74
CALD1-203ENST00000393118 ARID2Q68CP9 1835 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 A0A087WXM4 84 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 ARVCFO00192 962 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 AGRPO00253 132 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 COCHO43405 550 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 RNASEH2AO75792 299 aaKnown RBP10.41□□□□□ -0.74
CALD1-203ENST00000393118 BCAS2O75934 225 aaPredicted RBP10.41□□□□□ -0.74
CALD1-203ENST00000393118 CD1DP15813 335 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 EPB42P16452 691 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 NAT1P18440 290 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 ARNTP27540 789 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 CSKP41240 450 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 GDF5P43026 501 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 BCAP31P51572 246 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 DNAJB13P59910 316 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 CYP4F8P98187 520 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 BNIP3Q12983 259 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 TUBB3Q13509 450 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 PLCL1Q15111 1095 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 PTPRRQ15256 657 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 FAM98BQ52LJ0 330 aaKnown RBP10.41□□□□□ -0.74
CALD1-203ENST00000393118 RABL3Q5HYI8 236 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 TXNDC11Q6PKC3 985 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 PRR23CQ6ZRP0 262 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 MFSD6LQ8IWD5 586 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 LSMEM2Q8N112 164 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 GAB3Q8WWW8 586 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 CAPNS2Q96L46 248 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 TMEM74Q96NL1 305 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 CITED4Q96RK1 184 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 ATP13A3Q9H7F0 1226 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 GNPTGQ9UJJ9 305 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 PNMA8BQ9ULN7 279 aaPredicted RBP10.41□□□□□ -0.74
CALD1-203ENST00000393118 SPO11Q9Y5K1 396 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 K7EPI3 171 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 SLC22A2O15244 555 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 RGS14O43566 566 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 GSRP00390 522 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 GSNP06396 782 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 ENO2P09104 434 aaPredicted RBP10.41□□□□□ -0.74
CALD1-203ENST00000393118 FCGR1AP12314 374 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 MAGEA11P43364 429 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 SMARCB1Q12824 385 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 PSAPL1Q6NUJ1 521 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 CACUL1Q86Y37 369 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 OFCC1Q8IZS5 231 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 RBFAQ8N0V3 343 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 ALG2Q9H553 416 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 COMMD8Q9NX08 183 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 SLC25A13Q9UJS0 675 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 INVSQ9Y283 1065 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 FER1L6Q2WGJ9 1857 aa10.41□□□□□ -0.74
CALD1-203ENST00000393118 TBC1D4O60343 1298 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms