RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.6□□□□□ -0.077e-7■■■□□ 18.6
CCDC50-201ENST00000392455 GCNT6Q5T4J0 391 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 P2RY8Q86VZ1 359 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 ZNF606Q8WXB4 792 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 GTPBP2Q9BX10 602 aaKnown RBP14.6□□□□□ -0.07
CCDC50-201ENST00000392455 ABCG4Q9H172 646 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 DDTLA6NHG4 134 aaPredicted RBP14.6□□□□□ -0.07
CCDC50-201ENST00000392455 HHLA1C9JL84 531 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 TXNL4AP83876 142 aaKnown RBP14.6□□□□□ -0.07
CCDC50-201ENST00000392455 RAET1GQ6H3X3 334 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 TRIM36Q9NQ86 728 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 ADGRE2Q9UHX3 823 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 VLDLRP98155 873 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 GCNT1Q02742 428 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 PCDH12Q9NPG4 1184 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 RUVBL1Q9Y265 456 aaKnown RBP14.6□□□□□ -0.07
CCDC50-201ENST00000392455 ERCC6L2Q5T890 1561 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 PPM1BO75688 479 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 RAB36O95755 333 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 MAP3K8P41279 467 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 HAGHLQ6PII5 290 aaPredicted RBP14.59□□□□□ -0.07
CCDC50-201ENST00000392455 ADGRD2Q7Z7M1 963 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 GRIN3AQ8TCU5 1115 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 NR4A3Q92570 626 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 AKT1S1Q96B36 256 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 OR10A4Q9H209 315 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 ZBTB22O15209 634 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 EIF4BP23588 611 aaKnown RBP14.59□□□□□ -0.07
CCDC50-201ENST00000392455 CLCN7P51798 805 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 ZER1Q7Z7L7 766 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 DNASE1L2Q92874 299 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 ZFP57Q9NU63 452 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 PRORSD1PA6NEY8 169 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 RORAP35398 523 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 BDH1Q02338 343 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 CLIP3Q96DZ5 547 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 HSPA12BQ96MM6 686 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 EHD4Q9H223 541 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 TREM1Q9NP99 234 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 TBC1D3BA6NDS4 549 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 HTR2AP28223 471 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 GRIA4P48058 902 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 MAB21L1Q13394 359 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 ZNF792Q3KQV3 632 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 CRTAC1Q9NQ79 661 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 SMPD3Q9NY59 655 aaPredicted RBP14.59□□□□□ -0.07
CCDC50-201ENST00000392455 TMEM150BA6NC51 233 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 MATN4O95460 622 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 FABP3P05413 133 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 ADRA1DP25100 572 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 GNMTQ14749 295 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 POM121L1PQ3SYA9 428 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 GPAT4Q86UL3 456 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 CERS2Q96G23 380 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.59□□□□□ -0.07
CCDC50-201ENST00000392455 RPH3AQ9Y2J0 694 aaPredicted RBP14.59□□□□□ -0.07
CCDC50-201ENST00000392455 SPIN1Q9Y657 262 aaPredicted RBP14.59□□□□□ -0.07
CCDC50-201ENST00000392455 FRMPD4Q14CM0 1322 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 PRKD3O94806 890 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 MT-CO2P00403 227 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 LPOP22079 712 aaPredicted RBP14.59□□□□□ -0.07
CCDC50-201ENST00000392455 HTR7P34969 479 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 TTLQ8NG68 377 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 SLC5A5Q92911 643 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 SLC22A2O15244 555 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 GMFGO60234 142 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 ENTPD6O75354 484 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 PRAMEF1O95521 474 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 SRPRAP08240 638 aaKnown RBP14.59□□□□□ -0.07
CCDC50-201ENST00000392455 PSEN2P49810 448 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 SEC23BQ15437 767 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 OR5J2Q8NH18 312 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 DNAJC5Q9H3Z4 198 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 CD320Q9NPF0 282 aa14.59□□□□□ -0.07
CCDC50-201ENST00000392455 FRMPD1Q5SYB0 1578 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 ZNF782Q6ZMW2 699 aaPredicted RBP14.58□□□□□ -0.07
CCDC50-201ENST00000392455 LINGO2Q7L985 606 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 OR2T34Q8NGX1 318 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 OR2T3Q8NH03 318 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 BORCS8Q96FH0 119 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 PBDC1Q9BVG4 233 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 SERINC1Q9NRX5 453 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 SSTR1P30872 391 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 POLR2HP52434 150 aaKnown RBP14.58□□□□□ -0.07
CCDC50-201ENST00000392455 TGFB2P61812 414 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 TRAM1Q15629 374 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 PDK4Q16654 411 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 C6orf52Q5T4I8 152 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 TNS4Q8IZW8 715 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 TUBA1CQ9BQE3 449 aa14.58□□□□□ -0.07
CCDC50-201ENST00000392455 H3BM21 787 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 SLC12A3P55017 1021 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 PPP3CAQ08209 521 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 AARDQ4LEZ3 155 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 POF1BQ8WVV4 589 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 COQ8BQ96D53 544 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 AP4B1Q9Y6B7 739 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 ANGPTL1O95841 491 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 GLI1P08151 1106 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 SLC6A3Q01959 620 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms