RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PRSS1P07477 247 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 SRPRAP08240 638 aaKnown RBP2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 PATE4P0C8F1 98 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 IGHV4-38-2P0DP08 117 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 PRLRP16471 622 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 ANXA7P20073 488 aaKnown RBP2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 PON1P27169 355 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 PSMB10P40306 273 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 PIK3CAP42336 1068 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 MSH2P43246 934 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 VEGFCP49767 419 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 MMP15P51511 669 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 GNB1P62873 340 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 CDC16Q13042 620 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 KRT32Q14532 448 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 DUOXA1Q1HG43 343 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 GKAP1Q5VSY0 366 aaPredicted RBP2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 TMEM198Q66K66 360 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 TMEM154Q6P9G4 183 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 ANO5Q75V66 913 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 TBC1D1Q86TI0 1168 aaPredicted RBP2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 GALNT13Q8IUC8 556 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 C1orf52Q8N6N3 182 aaKnown RBP2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 SCFD2Q8WU76 684 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 WBP2Q969T9 261 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 ELMOD3Q96FG2 381 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 ZNF583Q96ND8 569 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 ASCL2Q99929 193 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 SEMA3CQ99985 751 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 NCAPGQ9BPX3 1015 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 KAT14Q9H8E8 782 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 WSB2Q9NYS7 404 aaPredicted RBP2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 DNAJB4Q9UDY4 337 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 FBXL17Q9UF56 701 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 AMACRQ9UHK6 382 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 SOS1Q07889 1333 aaPredicted RBP2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 AGAP14A8MT82 685 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 PRR32B1ATL7 298 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 TMEM178BH3BS89 294 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 SLC22A2O15244 555 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 PAPSS1O43252 624 aaPredicted RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 KCNK5O95279 499 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 CGAP01215 116 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 GH2P01242 217 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 LIFP15018 202 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 TNFAIP3P21580 790 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 GARSP41250 739 aaKnown RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 AMPHP49418 695 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 CAMPP49913 170 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 DVL1P1P54792 670 aaPredicted RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 MRPS5P82675 430 aaKnown RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 CXCL9Q07325 125 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 OTUD3Q5T2D3 398 aaPredicted RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 HAUS3Q68CZ6 603 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 KIAA0930Q6ICG6 404 aaPredicted RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 IKBIPQ70UQ0 350 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 CHST9Q7L1S5 443 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 TRPT1Q86TN4 253 aaKnown RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 CCDC190Q86UF4 302 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 LONP2Q86WA8 852 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 PTOV1Q86YD1 416 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 CERS3Q8IU89 383 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 KRTAP7-1Q8IUC3 87 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 ARID3BQ8IVW6 561 aaPredicted RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 GPALPP1Q8IXQ4 340 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 WDTC1Q8N5D0 677 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 GBGT1Q8N5D6 347 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 PAF1Q8N7H5 531 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 PDILTQ8N807 584 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 CNBD1Q8NA66 436 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 ZBTB8BQ8NAP8 495 aaPredicted RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 OR2T12Q8NG77 320 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 ZNF473Q8WTR7 871 aaKnown RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 UCMAQ8WVF2 138 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 TM9SF4Q92544 642 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 CEP295NLQ96MC4 621 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 NUDCD1Q96RS6 583 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 PPIL3Q9H2H8 161 aaKnown RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 PLK3Q9H4B4 646 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 SH2D4AQ9H788 454 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 APOBEC3GQ9HC16 384 aaKnown RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 PAG1Q9NWQ8 432 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 ADPRHL2Q9NX46 363 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 OGFRQ9NZT2 677 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 SEC63Q9UGP8 760 aaKnown RBP2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 RALGAPA1Q6GYQ0 2036 aa2.13□□□□□ -2.07
RNU6-541P-201ENST00000384709 GON4LQ3T8J9 2241 aa2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 NDUFS4O43181 175 aa2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 GPR137BO60478 399 aa2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 MITFO75030 526 aaPredicted RBP2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 GPC4O75487 556 aa2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 NADKO95544 446 aaPredicted RBP2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 APOHP02749 345 aaPredicted RBP2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 PRSS56P0CW18 603 aa2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 RNF224P0DH78 156 aa2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 GNB3P16520 340 aa2.12□□□□□ -2.07
RNU6-541P-201ENST00000384709 MSH3P20585 1137 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms