RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 TOP1MTQ969P6 601 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 HNRNPABQ99729 332 aaKnown RBP13.85□□□□□ -0.19
SNPH-201ENST00000381867 GLOD4Q9HC38 313 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 OR10H1Q9Y4A9 318 aa13.85□□□□□ -0.19
SNPH-201ENST00000381867 ORC5O43913 435 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 IL1BP01584 269 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 NR4A1P22736 598 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 MMP8P22894 467 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 AZGP1P25311 298 aaKnown RBP13.84□□□□□ -0.19
SNPH-201ENST00000381867 ACADLP28330 430 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 TIE1P35590 1138 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 KIR3DL1P43629 444 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 GJA9P57773 515 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 RFWD3Q6PCD5 774 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 UBR7Q8N806 425 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 CXorf40BQ96DE9 158 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 FCRL4Q96PJ5 515 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 TMPRSS4Q9NRS4 437 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 ZNF490Q9ULM2 529 aaPredicted RBP13.84□□□□□ -0.19
SNPH-201ENST00000381867 H6PDO95479 791 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 ARFIP1P53367 373 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 ARL13AQ5H913 290 aaPredicted RBP13.84□□□□□ -0.19
SNPH-201ENST00000381867 RAET1GQ6H3X3 334 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 C1orf127Q8N9H9 656 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 CLHC1Q8NHS4 586 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 RAD51AP1Q96B01 352 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 FUBP3Q96I24 572 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNPH-201ENST00000381867 TSSK3Q96PN8 268 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 TMEM175Q9BSA9 504 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 FADS2P1A8MWK0 482 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 ERAL1O75616 437 aaKnown RBP13.84□□□□□ -0.19
SNPH-201ENST00000381867 ADH1CP00326 375 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 GPR1P46091 355 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 BRCC3P46736 316 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 RBBP4Q09028 425 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 SNAPC1Q16533 368 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 SIAH1Q8IUQ4 282 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 DNAJC1Q96KC8 554 aaKnown RBP13.84□□□□□ -0.19
SNPH-201ENST00000381867 TUBGCP5Q96RT8 1024 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 BTAF1O14981 1849 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 CCDC88AQ3V6T2 1871 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 CDH5P33151 784 aaPredicted RBP13.84□□□□□ -0.19
SNPH-201ENST00000381867 OR1D2P34982 312 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 IDH3AP50213 366 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 PPP2R2BQ00005 443 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 PTP4A2Q12974 167 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 FUT10Q6P4F1 479 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 SLC26A9Q7LBE3 791 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 C12orf65Q9H3J6 166 aaKnown RBP13.84□□□□□ -0.19
SNPH-201ENST00000381867 CLEC4AQ9UMR7 237 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 POMPQ9Y244 141 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 MAN2B2Q9Y2E5 1009 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 COQ4Q9Y3A0 265 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 NHSQ6T4R5 1651 aa13.84□□□□□ -0.19
SNPH-201ENST00000381867 TLR5O60602 858 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 IFNA6P05013 189 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 LIMK2P53671 638 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 ABRQ12979 859 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 TRIM74Q86UV6 250 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 TRIM73Q86UV7 250 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 CYP4X1Q8N118 509 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 LRRC57Q8N9N7 239 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 KREMEN1Q96MU8 473 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 TRPS1Q9UHF7 1281 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 AGO1Q9UL18 857 aaKnown RBP13.83□□□□□ -0.19
SNPH-201ENST00000381867 CARD8Q9Y2G2 431 aa13.83□□□□□ -0.19
SNPH-201ENST00000381867 URADA6NGE7 173 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 OR10H2O60403 315 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 SLC25A12O75746 678 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 IFNA16P05015 189 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 AQP1P29972 269 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 CDH4P55283 916 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 RALGPS1Q5JS13 557 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 PLPP4Q5VZY2 271 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 CTU1Q7Z7A3 348 aaKnown RBP13.83□□□□□ -0.2
SNPH-201ENST00000381867 CLP1Q92989 425 aaKnown RBP13.83□□□□□ -0.2
SNPH-201ENST00000381867 TM6SF2Q9BZW4 377 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 TBC1D24Q9ULP9 559 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 TCRBV7S2A1N4TA0A589 114 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 OR14I1A6ND48 311 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 NT5C1B-RDH14C9J2C7 533 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 MANFP55145 182 aaKnown RBP13.83□□□□□ -0.2
SNPH-201ENST00000381867 FASTKD3Q14CZ7 662 aaKnown RBP13.83□□□□□ -0.2
SNPH-201ENST00000381867 VANGL1Q8TAA9 524 aaPredicted RBP13.83□□□□□ -0.2
SNPH-201ENST00000381867 RASSF5Q8WWW0 418 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 BTN2A3PQ96KV6 586 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 DNAJB4Q9UDY4 337 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 A0A1W2PQ67 120 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 ARL5CA6NH57 179 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 ZNF99A8MXY4 864 aaPredicted RBP13.83□□□□□ -0.2
SNPH-201ENST00000381867 FPGTO14772 594 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 PLIN3O60664 434 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 RPP40O75818 363 aaKnown RBP13.83□□□□□ -0.2
SNPH-201ENST00000381867 F2P00734 622 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 RPLP0P05388 317 aaKnown RBP13.83□□□□□ -0.2
SNPH-201ENST00000381867 NOVP48745 357 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 RAPSNQ13702 412 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 GCNT6Q5T4J0 391 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 USP43Q70EL4 1123 aa13.83□□□□□ -0.2
SNPH-201ENST00000381867 CHST15Q7LFX5 561 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms