RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 CUL1Q13616 776 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 HLTFQ14527 1009 aaKnown RBP eCLIP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 SEMA3AQ14563 771 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 HOOK3Q86VS8 718 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 MARCH9Q86YJ5 346 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 CLDN19Q8N6F1 224 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 SLC37A2Q8TED4 501 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 ZNF514Q96K75 400 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 PWWP2AQ96N64 755 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 TTC1Q99614 292 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 CCDC3Q9BQI4 270 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 FAM114A2Q9NRY5 505 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 MARCH4Q9P2E8 410 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 LRIT1Q9P2V4 623 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 RABGEF1Q9UJ41 708 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 GOLGA8KD6RF30 607 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 GOLGA8TH3BQL2 631 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 CASC3O15234 703 aaKnown RBP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 CD3EAPO15446 510 aaKnown RBP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 OPA1O60313 960 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 GP1BAP07359 652 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 F3P13726 295 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 GLB1P16278 677 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 IDSP22304 550 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 RPL21P46778 160 aaKnown RBP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 PPM1FP49593 454 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 NFE2L1Q14494 772 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 MORF4L2Q15014 288 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 BBS9Q3SYG4 887 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 HES3Q5TGS1 186 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 CCNI2Q6ZMN8 369 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 FAM83HQ6ZRV2 1179 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 AGGF1Q8N302 714 aaeCLIP19.06■□□□□ 0.647e-8■■□□□ 11.5
GTF3A-201ENST00000381140 STAMBPL1Q96FJ0 436 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 SCNM1Q9BWG6 230 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 KLK13Q9UKR3 277 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 PSMD13Q9UNM6 376 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 RPS6KL1Q9Y6S9 549 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 IGLV3-16A0A075B6K0 115 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 ESYT3A0FGR9 886 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 SGTAO43765 313 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 OR1I1O60431 355 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 SEC31AO94979 1220 aaKnown RBP19.05■□□□□ 0.64
GTF3A-201ENST00000381140 CDK4P11802 303 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 SLC2A4P14672 509 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 PAMP19021 973 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 MAGEA3P43357 314 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 PRLHRP49683 370 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 CLCNKAP51800 687 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 INSM1Q01101 510 aaPredicted RBP19.05■□□□□ 0.64
GTF3A-201ENST00000381140 DHX9Q08211 1270 aaKnown RBP19.05■□□□□ 0.64
GTF3A-201ENST00000381140 ITIH4Q14624 930 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 ANKRD20A4Q4UJ75 823 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 BCL7AQ4VC05 210 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 DNAJC21Q5F1R6 531 aaKnown RBP19.05■□□□□ 0.64
GTF3A-201ENST00000381140 HP1BP3Q5SSJ5 553 aaPredicted RBP19.05■□□□□ 0.64
GTF3A-201ENST00000381140 LYPLAL1Q5VWZ2 237 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 HIBCHQ6NVY1 386 aaPredicted RBP19.05■□□□□ 0.64
GTF3A-201ENST00000381140 ZNF761Q86XN6 746 aaPredicted RBP19.05■□□□□ 0.64
GTF3A-201ENST00000381140 OR6C4Q8NGE1 309 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.05■□□□□ 0.64
GTF3A-201ENST00000381140 SIGLEC10Q96LC7 697 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 FCRL3Q96P31 734 aaPredicted RBP19.05■□□□□ 0.64
GTF3A-201ENST00000381140 FAM129AQ9BZQ8 928 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 ARGLU1Q9NWB6 273 aaPredicted RBP19.05■□□□□ 0.64
GTF3A-201ENST00000381140 IL1RAPL1Q9NZN1 696 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 PRSS21Q9Y6M0 314 aa19.05■□□□□ 0.64
GTF3A-201ENST00000381140 FAM237BA0A1B0GVD1 139 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 MAGEB16A2A368 324 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 A6NCN8 305 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 MGAT4DA6NG13 374 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 POLBP06746 335 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 ARNTP27540 789 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 NSG1P42857 185 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 MSS51Q4VC12 460 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 AARS2Q5JTZ9 985 aaKnown RBP19.04■□□□□ 0.64
GTF3A-201ENST00000381140 KIAA0930Q6ICG6 404 aaPredicted RBP19.04■□□□□ 0.64
GTF3A-201ENST00000381140 IYDQ6PHW0 289 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 CERS6Q6ZMG9 384 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 SCHIP1Q9P0W5 487 aaPredicted RBP19.04■□□□□ 0.64
GTF3A-201ENST00000381140 ANGPTL2Q9UKU9 493 aa19.04■□□□□ 0.64
GTF3A-201ENST00000381140 DNMT3AQ9Y6K1 912 aaPredicted RBP19.04■□□□□ 0.64
GTF3A-201ENST00000381140 KIF26BQ2KJY2 2108 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 PPM1DO15297 605 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 NUDT21O43809 227 aaKnown RBP19.03■□□□□ 0.64
GTF3A-201ENST00000381140 KCNJ13O60928 360 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 ERLIN1O75477 346 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 RPLP0P05388 317 aaKnown RBP19.03■□□□□ 0.64
GTF3A-201ENST00000381140 JUPP14923 745 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 ALDH4A1P30038 563 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 PPARGP37231 505 aaPredicted RBP19.03■□□□□ 0.64
GTF3A-201ENST00000381140 CARSP49589 748 aaKnown RBP19.03■□□□□ 0.64
GTF3A-201ENST00000381140 CCL7P80098 99 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 CALCOCO2Q13137 446 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 FBXO38Q6PIJ6 1188 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 C17orf82Q86X59 251 aaPredicted RBP19.03■□□□□ 0.64
GTF3A-201ENST00000381140 CCNJLQ8IV13 435 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 TRIM48Q8IWZ4 208 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 CFAP206Q8IYR0 622 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 PDIK1LQ8N165 341 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms