RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ICMTO60725 284 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 OR4F21O95013 312 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 CDH1P12830 882 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 GPX3P22352 226 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PRKACGP22612 351 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 SLC6A2P23975 617 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 RENBPP51606 427 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PLA2G16P53816 162 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 KCNK10P57789 538 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 INPP5AQ14642 412 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 HERC3Q15034 1050 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ACAP2Q15057 778 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PTPRNQ16849 979 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 LGI2Q8N0V4 545 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PGBD5Q8N414 524 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PSD4Q8NDX1 1056 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 OR4K2Q8NGD2 314 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 OR6K2Q8NGY2 324 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 FIG4Q92562 907 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 LRRC58Q96CX6 371 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 TSPAN17Q96FV3 270 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 SLC30A3Q99726 388 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 TMEM181Q9P2C4 612 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 FAM8A1Q9UBU6 413 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PADI3Q9ULW8 664 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 TCRBV3S1A0A5B6 114 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 SNPHO15079 494 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 TEX28O15482 410 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 HOXC11O43248 304 aaPredicted RBP12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 BMP1P13497 986 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 CLCN5P51795 746 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 GRSF1Q12849 480 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 CBLBQ13191 982 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 UPP1Q16831 310 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 RAB41Q5JT25 222 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 GDF6Q6KF10 455 aaPredicted RBP12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 FBXL22Q6P050 247 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ZNF280BQ86YH2 543 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 FAM20CQ8IXL6 584 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ANKFN1Q8N957 763 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PSMA8Q8TAA3 256 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 RAB2BQ8WUD1 216 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 MAGED4Q96JG8 741 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 CDK5RAP1Q96SZ6 601 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ABCB10Q9NRK6 738 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ABCC13Q9NSE7 274 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 CD300AQ9UGN4 299 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 EIF2B4Q9UI10 523 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 UGT2A1Q9Y4X1 527 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 AGRPO00253 132 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 GPR182O15218 404 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PSMD3O43242 534 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ASNA1O43681 348 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 MFN2O95140 757 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 CNPP09543 421 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 IL7RP16871 459 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PRKCAP17252 672 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PRKACBP22694 351 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 OR4D2P58180 307 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 HERVK_113P63132 956 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ZRANB3Q5FWF4 1079 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 LINGO4Q6UY18 593 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ERMP1Q7Z2K6 904 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ABI1Q8IZP0 508 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 SIDT2Q8NBJ9 832 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 NACC2Q96BF6 587 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 FUNDC2Q9BWH2 189 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ERVK-6Q9BXR3 956 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 SLC25A51Q9H1U9 297 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 ALG2Q9H553 416 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 TBC1D13Q9NVG8 400 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PKD2L2Q9NZM6 624 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
PRPF40B-202ENST00000380281 MBLAC1A4D2B0 266 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 NUAK1O60285 661 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 B4GALT3O60512 393 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 NDUFS3O75489 264 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 CRYZL1O95825 349 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 MYCP01106 439 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 CHRNA1P02708 482 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 IRF1P10914 325 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 BMP4P12644 408 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 LBPP18428 481 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 AXLP30530 894 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 KCNQ1P51787 676 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 MLLT6P55198 1093 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 CEP78Q5JTW2 689 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 KDELC1Q6UW63 502 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 DHRSXQ8N5I4 330 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 SLC43A3Q8NBI5 491 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 OR52B6Q8NGF0 335 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 RMND5AQ9H871 391 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 ZFP14Q9HCL3 533 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 AKIP1Q9NQ31 210 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 TRIM64A6NGJ6 449 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 GNGT2O14610 69 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 RAMP2O60895 175 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 DLGAP3O95886 979 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 BMP2P12643 396 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms