RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 TM9SF3Q9HD45 589 aa13.89□□□□□ -0.19
HERPUD1-203ENST00000379792 TM7SF3Q9NS93 570 aa13.89□□□□□ -0.19
HERPUD1-203ENST00000379792 TRMT6Q9UJA5 497 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-203ENST00000379792 TLK1Q9UKI8 766 aa13.89□□□□□ -0.19
HERPUD1-203ENST00000379792 COMMD10Q9Y6G5 202 aa13.89□□□□□ -0.19
HERPUD1-203ENST00000379792 SDK1Q7Z5N4 2213 aa13.89□□□□□ -0.19
HERPUD1-203ENST00000379792 ATXN2Q99700 1313 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-203ENST00000379792 H3BMM5 538 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 NUAK1O60285 661 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 LILRB5O75023 590 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 POP7O75817 140 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 THEGLP0DJG4 465 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 CRABP2P29373 138 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 HPDP32754 393 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 MAGEA12P43365 314 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 RABIFP47224 123 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 KIAA1024LP59773 190 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 GPS2Q13227 327 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 TCEA2Q15560 299 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 PLK5Q496M5 336 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 SLC22A18ASQ8N1D0 253 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 PLD6Q8N2A8 252 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 LILRA3Q8N6C8 439 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 CD200R1Q8TD46 325 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 ANKRD49Q8WVL7 239 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 OR1E3Q8WZA6 343 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 ISL2Q96A47 359 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 KLHDC7BQ96G42 594 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 WDR92Q96MX6 357 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 C12orf65Q9H3J6 166 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 CYP4F12Q9HCS2 524 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 ZNF358Q9NW07 568 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 ZSCAN32Q9NX65 697 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 SLC23A2Q9UGH3 650 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 PNMA8BQ9ULN7 279 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 SLC17A4Q9Y2C5 497 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 HMGB1P1B2RPK0 211 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 CHUKO15111 745 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 GRID2O43424 1007 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 HOXC4P09017 264 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 BRAFP15056 766 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 CD38P28907 300 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 GNPDA1P46926 289 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 PRLHRP49683 370 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 CSRP3P50461 194 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 YPEL5P62699 121 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 DLG1Q12959 904 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 BOP1Q14137 746 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 BCL7AQ4VC05 210 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 ZNF542PQ5EBM4 170 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 WDR45BQ5MNZ6 344 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 PMS2CLQ68D20 193 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 ALYREFQ86V81 257 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 CPNE9Q8IYJ1 553 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 OR56A4Q8NGH8 313 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 C1orf216Q8TAB5 229 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 KCTD4Q8WVF5 259 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 DNASE2BQ8WZ79 361 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 ELMO1Q92556 727 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 SMC6Q96SB8 1091 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 CCM2Q9BSQ5 444 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 KCNK9Q9NPC2 374 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 MED4Q9NPJ6 270 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 SPATS2LQ9NUQ6 558 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 SUFUQ9UMX1 484 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 ACOT9Q9Y305 439 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 DHRS7Q9Y394 339 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 PLEKHM1Q9Y4G2 1056 aa13.88□□□□□ -0.19
HERPUD1-203ENST00000379792 PLXND1Q9Y4D7 1925 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 FANCMQ8IYD8 2048 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 A0A1W2PR77 199 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 PRSS38A1L453 326 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 FTH1P02794 183 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 MPOP05164 745 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 CCDC166P0CW27 439 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 AOAHP28039 575 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 HTR1BP28222 390 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 CSNK1EP49674 416 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 RACK1P63244 317 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 SLC18A2Q05940 514 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 HSPA14Q0VDF9 509 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 ILF2Q12905 390 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 TAF1BQ53T94 588 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 ACSBG2Q5FVE4 666 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 LYSMD4Q5XG99 296 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 CDHR3Q6ZTQ4 885 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 OTOAQ7RTW8 1153 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 LRRTM4Q86VH4 590 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 ZBTB2Q8N680 514 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 BANPQ8N9N5 519 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 ZBTB44Q8NCP5 570 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 ACMSDQ8TDX5 336 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 EEF1AKMT1Q8WVE0 214 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 INPP5DQ92835 1189 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 NXNL1Q96CM4 212 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 PDXPQ96GD0 296 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 PANX3Q96QZ0 392 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 CARS2Q9HA77 564 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 DNAJC16Q9Y2G8 782 aa13.87□□□□□ -0.19
HERPUD1-203ENST00000379792 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms