RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 RFX5P48382 616 aaPredicted RBP16.17■□□□□ 0.18
RGP1-201ENST00000378078 MECP2P51608 486 aaKnown RBP16.17■□□□□ 0.18
RGP1-201ENST00000378078 SLC5A3P53794 718 aa16.17■□□□□ 0.18
RGP1-201ENST00000378078 TIGD2Q4W5G0 525 aa16.17■□□□□ 0.18
RGP1-201ENST00000378078 EIF1ADQ8N9N8 165 aaKnown RBP16.17■□□□□ 0.18
RGP1-201ENST00000378078 OR7D4Q8NG98 312 aa16.17■□□□□ 0.18
RGP1-201ENST00000378078 RPH3AQ9Y2J0 694 aaPredicted RBP16.17■□□□□ 0.18
RGP1-201ENST00000378078 A0A1W2PPM1 405 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 NFATC1O95644 943 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 MAPTP10636 758 aaKnown RBP16.16■□□□□ 0.18
RGP1-201ENST00000378078 FSHRP23945 695 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 ACVR2AP27037 513 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 RGS21Q2M5E4 152 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 IL31RAQ8NI17 732 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 CLP1Q92989 425 aaKnown RBP16.16■□□□□ 0.18
RGP1-201ENST00000378078 HAVCR1Q96D42 359 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 KCTD15Q96SI1 283 aaPredicted RBP16.16■□□□□ 0.18
RGP1-201ENST00000378078 WDR55Q9H6Y2 383 aaPredicted RBP16.16■□□□□ 0.18
RGP1-201ENST00000378078 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.16■□□□□ 0.18
RGP1-201ENST00000378078 FKBP7Q9Y680 259 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 ZNF726A6NNF4 738 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 PDPK1O15530 556 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 ZNF20P17024 532 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 ZNF557Q8N988 423 aaPredicted RBP16.16■□□□□ 0.18
RGP1-201ENST00000378078 TSTD1Q8NFU3 115 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 C12orf65Q9H3J6 166 aaKnown RBP16.16■□□□□ 0.18
RGP1-201ENST00000378078 POLMQ9NP87 494 aaPredicted RBP16.16■□□□□ 0.18
RGP1-201ENST00000378078 ZNF510Q9Y2H8 683 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 AP5Z1O43299 807 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 CDK7P50613 346 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 GTF2H2Q13888 395 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 GTF2H2CQ6P1K8 395 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 TMC8Q8IU68 726 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 ANKRD52Q8NB46 1076 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 AP3S1Q92572 193 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 GPR21Q99679 349 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 LRTM1Q9HBL6 345 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 TMCO1Q9UM00 188 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 ASGR1P07306 291 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 WNT3AP56704 352 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 CAP1Q01518 475 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 ECH1Q13011 328 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 GPR68Q15743 365 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 PPM1JQ5JR12 505 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 SLCO6A1Q86UG4 719 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 SLAIN1Q8ND83 568 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 COMMD4Q9H0A8 199 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 SULT2A1Q06520 285 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 TMPRSS11AQ6ZMR5 421 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 ZNF598Q86UK7 904 aaKnown RBP16.16■□□□□ 0.18
RGP1-201ENST00000378078 SPATA22Q8NHS9 363 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 JPH3Q8WXH2 748 aaPredicted RBP16.16■□□□□ 0.18
RGP1-201ENST00000378078 KXD1Q9BQD3 176 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 DUSP16Q9BY84 665 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 RBCK1Q9BYM8 510 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 BLOC1S4Q9NUP1 217 aa16.16■□□□□ 0.18
RGP1-201ENST00000378078 DHRS12A0PJE2 317 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 CLEC3AO75596 197 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 LRIG2O94898 1065 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 PRAMEF1O95521 474 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 RPL3P39023 403 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 NCBP2P52298 156 aaKnown RBP eCLIP16.15■□□□□ 0.186e-6■■□□□ 12.1
RGP1-201ENST00000378078 TAS2R40P59535 323 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 FOLH1Q04609 750 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 GNEQ9Y223 722 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 ANXA2P2A6NMY6 339 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 CPNE3O75131 537 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 ANXA2P07355 339 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 TSEN2Q8NCE0 465 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 AZIN2Q96A70 460 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 ZSCAN5AQ9BUG6 496 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 IFT27Q9BW83 186 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 KLRF1Q9NZS2 232 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 A2ML1A8K2U0 1454 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 NOBOXO60393 691 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 RPL10P27635 214 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 SPAM1P38567 509 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 VPS26BQ4G0F5 336 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 RNASEH2BQ5TBB1 312 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 ZPBP2Q6X784 338 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 PIK3R3Q92569 461 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 CDK15Q96Q40 435 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 TNFRSF11BO00300 401 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 POLR2JP52435 117 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 SNU13P55769 128 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 DCTN2Q13561 401 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 SCGB2B2Q4G0G5 96 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 ATP13A5Q4VNC0 1218 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 WASHC2DQ5SRD0 308 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 APOBEC3HQ6NTF7 200 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 ERICH5Q6P6B1 374 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 ADAMTSL2Q86TH1 951 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 KATNAL2Q8IYT4 538 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 PYROXD2Q8N2H3 581 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 TNFAIP8L1Q8WVP5 186 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 NXNL1Q96CM4 212 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 MCCC1Q96RQ3 725 aaPredicted RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 OR2AG1Q9H205 316 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 A0A1W2PRU2 124 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms