RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 IL12AP29459 219 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 ADARP55265 1226 aaKnown RBP12.76□□□□□ -0.37
USP11-204ENST00000377107 PGS1Q32NB8 556 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 FAM174BQ3ZCQ3 159 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 SPESP1Q6UW49 350 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 TMEM26Q6ZUK4 368 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 SLC22A15Q8IZD6 547 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 ADGRG5Q8IZF4 528 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 SCML4Q8N228 414 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 TEX26Q8N6G2 289 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 PLEKHG4BQ96PX9 1271 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 TDRD1Q9BXT4 1180 aaKnown RBP12.76□□□□□ -0.37
USP11-204ENST00000377107 DGCR6LQ9BY27 220 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 PAIP1Q9H074 479 aaKnown RBP12.76□□□□□ -0.37
USP11-204ENST00000377107 RNF38Q9H0F5 515 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 ATXN10Q9UBB4 475 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 ZNF225Q9UK10 706 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 GPR45Q9Y5Y3 372 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 CEPT1Q9Y6K0 416 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 ZBBXA8MT70 800 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 DFNA5O60443 496 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 NBNO60934 754 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 ZBTB11O95625 1053 aaPredicted RBP12.76□□□□□ -0.37
USP11-204ENST00000377107 GSSP48637 474 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 HSPA14Q0VDF9 509 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 BNIP2Q12982 314 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 ABRAXAS2Q15018 415 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 AASDHQ4L235 1098 aaPredicted RBP12.76□□□□□ -0.37
USP11-204ENST00000377107 PPP4R4Q6NUP7 873 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 SAPCD2Q86UD0 394 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 BPIFB6Q8NFQ5 453 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 TMEM125Q96AQ2 219 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 TYW5A2RUC4 315 aaKnown RBP12.76□□□□□ -0.37
USP11-204ENST00000377107 OR6C75A6NL08 312 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 EOMESO95936 686 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 MAP4P27816 1152 aaKnown RBP12.76□□□□□ -0.37
USP11-204ENST00000377107 NEK2P51955 445 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 SH3BGRP55822 239 aaPredicted RBP12.76□□□□□ -0.37
USP11-204ENST00000377107 DSC1Q08554 894 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 GPR17Q13304 367 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 GTF2H3Q13889 308 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 LDLRAP1Q5SW96 308 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 CYP20A1Q6UW02 462 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 XKR5Q6UX68 686 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 SERPINA9Q86WD7 417 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 SFRP1Q8N474 314 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 ZNF599Q96NL3 588 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 TSSK3Q96PN8 268 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 DPY30Q9C005 99 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 NAA50Q9GZZ1 169 aaKnown RBP12.76□□□□□ -0.37
USP11-204ENST00000377107 ACTR8Q9H981 624 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 CXorf21Q9HAI6 301 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 SMURF2Q9HAU4 748 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 INTS10Q9NVR2 710 aaKnown RBP12.76□□□□□ -0.37
USP11-204ENST00000377107 SLC8A2Q9UPR5 921 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 ZSWIM8A7E2V4 1837 aa12.76□□□□□ -0.37
USP11-204ENST00000377107 DRGXA6NNA5 263 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 MYO1GB0I1T2 1018 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 PRMT5O14744 637 aaPredicted RBP12.75□□□□□ -0.37
USP11-204ENST00000377107 CLDN7O95471 211 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 PRLP01236 227 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 ZNF140P52738 457 aaPredicted RBP12.75□□□□□ -0.37
USP11-204ENST00000377107 GTF2H2Q13888 395 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 POM121L1PQ3SYA9 428 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 GTDC1Q4AE62 458 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 CTSL3PQ5NE16 218 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 GTF2H2CQ6P1K8 395 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 TBPL2Q6SJ96 375 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 CARM1Q86X55 608 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 KRTCAP2Q8N6L1 136 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 RHEBL1Q8TAI7 183 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 CD200R1Q8TD46 325 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 BIRC8Q96P09 236 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 SMPD3Q9NY59 655 aaPredicted RBP12.75□□□□□ -0.37
USP11-204ENST00000377107 MED16Q9Y2X0 877 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 OAS3Q9Y6K5 1087 aaKnown RBP12.75□□□□□ -0.37
USP11-204ENST00000377107 A0A1W2PPW3 197 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 SYN3O14994 580 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 CLDN11O75508 207 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 HNRNPCP07910 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP11-204ENST00000377107 GJA1P17302 382 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 CDH4P55283 916 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 ERVK-8P63133 956 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 GALNT1Q10472 559 aaPredicted RBP12.75□□□□□ -0.37
USP11-204ENST00000377107 NHSL2Q5HYW2 709 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 ANKRD34AQ69YU3 496 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 ARL14EPQ8N8R7 260 aaPredicted RBP12.75□□□□□ -0.37
USP11-204ENST00000377107 TFAP2CQ92754 450 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 BEGAINQ9BUH8 593 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 BDH2Q9BUT1 245 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 AIG1Q9NVV5 245 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 IGLV3-10A0A075B6K4 115 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 ARVCFO00192 962 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 MTX2O75431 263 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 RSL1D1O76021 490 aaKnown RBP12.75□□□□□ -0.37
USP11-204ENST00000377107 ZNF682O95780 498 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 CKMP06732 381 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 FGF4P08620 206 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 SLC26A3P40879 764 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 MTHFRP42898 656 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms