RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ARMCX6Q7L4S7 300 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 RALGPS2Q86X27 583 aaPredicted RBP13.48□□□□□ -0.25
GPC6-201ENST00000377047 MAGEL2Q9UJ55 1249 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 G3V2T6 193 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 ACTR1BP42025 376 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 ACTR1AP61163 376 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 ZNF460Q14592 562 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 CA9Q16790 459 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 IL23RQ5VWK5 629 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 OAFQ86UD1 273 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 PCBD2Q9H0N5 130 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 U3KQV3 271 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 NFAT5O94916 1531 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 A0A0U1RQF3 1178 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 KLHL18O94889 574 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 ALDH4A1P30038 563 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 PBX1P40424 430 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 PTGER3P43115 390 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 FASTKD3Q14CZ7 662 aaKnown RBP13.48□□□□□ -0.25
GPC6-201ENST00000377047 ZBTB6Q15916 424 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 ABRAXAS1Q6UWZ7 409 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 SIPA1Q96FS4 1042 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 KCNS3Q9BQ31 491 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 CMTM6Q9NX76 183 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 HCN3Q9P1Z3 774 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 PAIP2BQ9ULR5 123 aaKnown RBP13.48□□□□□ -0.25
GPC6-201ENST00000377047 ERVK-11Q9UQG0 969 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 WNT9AO14904 365 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 RFTN1Q14699 578 aaPredicted RBP13.48□□□□□ -0.25
GPC6-201ENST00000377047 GRASPQ7Z6J2 395 aaPredicted RBP13.48□□□□□ -0.25
GPC6-201ENST00000377047 PIH1D2Q8WWB5 315 aa13.48□□□□□ -0.25
GPC6-201ENST00000377047 EIF2B4Q9UI10 523 aaKnown RBP13.48□□□□□ -0.25
GPC6-201ENST00000377047 IRAK2O43187 625 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 ZMIZ2Q8NF64 920 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 NKD2Q969F2 451 aaPredicted RBP13.47□□□□□ -0.25
GPC6-201ENST00000377047 COQ7Q99807 217 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 TBC1D10AQ9BXI6 508 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.47□□□□□ -0.25
GPC6-201ENST00000377047 OR5F1O95221 314 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 ACP5P13686 325 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 RFC2P35250 354 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 LIMK2P53671 638 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 SRP54P61011 504 aaKnown RBP13.47□□□□□ -0.25
GPC6-201ENST00000377047 ELF3P78545 371 aaPredicted RBP13.47□□□□□ -0.25
GPC6-201ENST00000377047 BROXQ5VW32 411 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 SYPL2Q5VXT5 272 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 AHI1Q8N157 1196 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 SUV39H2Q9H5I1 410 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 PSMD11O00231 422 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 FGF18O76093 207 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 TEAD2Q15562 447 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 LIX1Q8N485 282 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 AZIN2Q96A70 460 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 TTC24A2A3L6 582 aaPredicted RBP13.47□□□□□ -0.25
GPC6-201ENST00000377047 FAM86C2PA6NEL3 165 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 ESR1P03372 595 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 OMPP47874 163 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 PLA2G16P53816 162 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 ADGRF1Q5T601 910 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 ZNF366Q8N895 744 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 HOPXQ9BPY8 73 aaPredicted RBP13.47□□□□□ -0.25
GPC6-201ENST00000377047 TDRD1Q9BXT4 1180 aaKnown RBP13.47□□□□□ -0.25
GPC6-201ENST00000377047 CLEC4MQ9H2X3 399 aaPredicted RBP13.47□□□□□ -0.25
GPC6-201ENST00000377047 CORO1CQ9ULV4 474 aaPredicted RBP13.47□□□□□ -0.25
GPC6-201ENST00000377047 MAGEB3O15480 346 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 UROSP10746 265 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 RFX4Q33E94 735 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 DPYSL5Q9BPU6 564 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 NOCTQ9UK39 431 aaKnown RBP13.47□□□□□ -0.25
GPC6-201ENST00000377047 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
GPC6-201ENST00000377047 C2orf71A6NGG8 1288 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 PRR5-ARHGAP8B1AHC4 643 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 TGDSO95455 350 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 ZNF8P17098 575 aaPredicted RBP13.46□□□□□ -0.25
GPC6-201ENST00000377047 HOXC12P31275 282 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 LSM3P62310 102 aaKnown RBP13.46□□□□□ -0.25
GPC6-201ENST00000377047 ARHGAP8P85298 464 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 CXXC5Q7LFL8 322 aaKnown RBP13.46□□□□□ -0.25
GPC6-201ENST00000377047 PCDH19Q8TAB3 1148 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 ANKRD27Q96NW4 1050 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 SLC9A7Q96T83 725 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 NTPCRQ9BSD7 190 aaKnown RBP13.46□□□□□ -0.25
GPC6-201ENST00000377047 CNTN3Q9P232 1028 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 SLC11A1P49279 550 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 PTPN5P54829 565 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 SUZ12Q15022 739 aaKnown RBP13.46□□□□□ -0.25
GPC6-201ENST00000377047 HBEGFQ99075 208 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 RTKNQ9BST9 563 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 GABRQQ9UN88 632 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 WNT6Q9Y6F9 365 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 KHDRBS3O75525 346 aaKnown RBP13.46□□□□□ -0.25
GPC6-201ENST00000377047 OR4F21O95013 312 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 TNFP01375 233 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 RGS8P57771 180 aaPredicted RBP13.46□□□□□ -0.25
GPC6-201ENST00000377047 GRM2Q14416 872 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 SLC44A4Q53GD3 710 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 RASGRP3Q8IV61 690 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 DEFB119Q8N690 84 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 MINDY3Q9H8M7 445 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 SH3GLB1Q9Y371 365 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms