RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 NUDT5Q9UKK9 219 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 POLR2AP24928 1970 aaKnown RBP16.32■□□□□ 0.2
TRIM39-201ENST00000376656 IRAK2O43187 625 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 MGEA5O60502 916 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 KERAO60938 352 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 GLP2RO95838 553 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 RPS17P08708 135 aaKnown RBP16.32■□□□□ 0.2
TRIM39-201ENST00000376656 CYP2C18P33260 490 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 PCYT1AP49585 367 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 SUOXP51687 545 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 PRKG2Q13237 762 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 TOP3AQ13472 1001 aaPredicted RBP16.32■□□□□ 0.2
TRIM39-201ENST00000376656 CATSPEREQ5SY80 951 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 AFMIDQ63HM1 303 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 PAQR3Q6TCH7 311 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 EFHD2Q96C19 240 aaPredicted RBP16.32■□□□□ 0.2
TRIM39-201ENST00000376656 ZNF583Q96ND8 569 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 CGREF1Q99674 301 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 BTBD2Q9BX70 525 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 OSER1Q9NX31 292 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 FBXO10Q9UK96 956 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 ERVK-11Q9UQG0 969 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 INVSQ9Y283 1065 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 ARL5AQ9Y689 179 aa16.32■□□□□ 0.2
TRIM39-201ENST00000376656 CDC7O00311 574 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 GNGT2O14610 69 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 IGLV3-25P01717 112 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 DGUOKQ16854 277 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 DPP10Q8N608 796 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 SCAMP5Q8TAC9 235 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 KIAA1191Q96A73 305 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 SMARCD1Q96GM5 515 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 CTRCQ99895 268 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 EHD1Q9H4M9 534 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 PIM2Q9P1W9 311 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 ERVK-18Q9QC07 812 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 GALPQ9UBC7 116 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 AASSQ9UDR5 926 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 FAM50BQ9Y247 325 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 NEUROG3Q9Y4Z2 214 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 SLC22A1O15245 554 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 GJB3O75712 270 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 UROSP10746 265 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 PGFP49763 221 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 EIF4EBP2Q13542 120 aaPredicted RBP16.31■□□□□ 0.2
TRIM39-201ENST00000376656 RBBP7Q16576 425 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 HIST2H2ACQ16777 129 aaPredicted RBP16.31■□□□□ 0.2
TRIM39-201ENST00000376656 ATP6AP1LQ52LC2 224 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 ZNF691Q5VV52 312 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 RTL3Q8N8U3 475 aaKnown RBP16.31■□□□□ 0.2
TRIM39-201ENST00000376656 STAG3L4Q8TBR4 150 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 HGH1Q9BTY7 390 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 RMND5AQ9H871 391 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 ELP3Q9H9T3 547 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 UXTQ9UBK9 157 aaPredicted RBP16.31■□□□□ 0.2
TRIM39-201ENST00000376656 LIMD1Q9UGP4 676 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 ZNF229Q9UJW7 825 aa16.31■□□□□ 0.2
TRIM39-201ENST00000376656 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
TRIM39-201ENST00000376656 ZBBXA8MT70 800 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 DNAJB5O75953 348 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 NPPAP01160 153 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 NCS1P62166 190 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 EPS8Q12929 822 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
TRIM39-201ENST00000376656 OR13C4Q8NGS5 318 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 MYLPFQ96A32 169 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 HBEGFQ99075 208 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 RBM4BQ9BQ04 359 aaKnown RBP16.3■□□□□ 0.2
TRIM39-201ENST00000376656 RBM4Q9BWF3 364 aaKnown RBP16.3■□□□□ 0.2
TRIM39-201ENST00000376656 NUSAP1Q9BXS6 441 aaKnown RBP16.3■□□□□ 0.2
TRIM39-201ENST00000376656 USE1Q9NZ43 259 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 ASB1Q9Y576 335 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 E9PAM4 449 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 CHEK2O96017 543 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 PIRTP0C851 137 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 SLC13A2Q13183 592 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 DYNC2LI1Q8TCX1 351 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 MCOLN3Q8TDD5 553 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 RORBQ92753 470 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 SLC47A1Q96FL8 570 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 CDK15Q96Q40 435 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 C17orf80Q9BSJ5 609 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 AARSD1Q9BTE6 412 aaKnown RBP16.3■□□□□ 0.2
TRIM39-201ENST00000376656 UGT2B28Q9BY64 529 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 INTS6Q9UL03 887 aaKnown RBP16.3■□□□□ 0.2
TRIM39-201ENST00000376656 PTCH2Q9Y6C5 1203 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 MEIS3P2A8K0S8 358 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 SYCE1LA8MT33 242 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 OR4F21O95013 312 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 ATXN1LP0C7T5 689 aaKnown RBP16.3■□□□□ 0.2
TRIM39-201ENST00000376656 TGFBR1P36897 503 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 ILF2Q12905 390 aaKnown RBP16.3■□□□□ 0.2
TRIM39-201ENST00000376656 CDK5R2Q13319 367 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 SETMARQ53H47 684 aaPredicted RBP16.3■□□□□ 0.2
TRIM39-201ENST00000376656 Q6ZSR9 355 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 NECAB2Q7Z6G3 386 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 CDYL2Q8N8U2 506 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 BLOC1S5Q8TDH9 187 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 TPK1Q9H3S4 243 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 ACTL8Q9H568 366 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms