RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 GMIPQ9P107 970 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 PCDHGA8Q9Y5G5 932 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 A0A1W2PQH9 124 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 ARL5CA6NH57 179 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 SNX2O60749 519 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 ABCB7O75027 752 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 B3GAT3O94766 335 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 RHOBTB1O94844 696 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 HTR1AP08908 422 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 IDUAP35475 653 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 RAB15P59190 212 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 LAPTM5Q13571 262 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 RBBP7Q16576 425 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 SDHAF4Q5VUM1 108 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 THAP5Q7Z6K1 395 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 CIR1Q86X95 450 aaPredicted RBP13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 TMCO5AQ8N6Q1 288 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 FNDC5Q8NAU1 212 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 ABHD11Q8NFV4 315 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 STAG3L4Q8TBR4 150 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 KIAA1191Q96A73 305 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 ADAM2Q99965 735 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 AARSD1Q9BTE6 412 aaKnown RBP13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 EXD2Q9NVH0 621 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 SUN2Q9UH99 717 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 UTS2RQ9UKP6 389 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 NPEPPSL1A6NEC2 478 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 GPR182O15218 404 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 KERAO60938 352 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 CDH1P12830 882 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 NFKBIAP25963 317 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 HALP42357 657 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 MTHFRP42898 656 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 SUOXP51687 545 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 DGKQP52824 942 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 SPATS1Q496A3 300 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 MRNIPQ6NTE8 343 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 NIPAL1Q6NVV3 410 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 PROSER1Q86XN7 944 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 HID1Q8IV36 788 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 RAB2BQ8WUD1 216 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 SEMA3CQ99985 751 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 HGH1Q9BTY7 390 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 FUNDC2Q9BWH2 189 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 LRRC3Q9BY71 257 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 RAD21L1Q9H4I0 556 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 CATSPERZQ9NTU4 200 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 MED16Q9Y2X0 877 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 ST14Q9Y5Y6 855 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 LOC285095A0A1B0GVY8 99 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 F8W810 466 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 TOR1BO14657 336 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 MUSKO15146 869 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 MAN1A2O60476 641 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 VPS4BO75351 444 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 BCAS1O75363 584 aaPredicted RBP13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 POMCP01189 267 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 AGXTP21549 392 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 PIGAP37287 484 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 GRIK1P39086 918 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 UPP1Q16831 310 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 DPY19L1Q2PZI1 675 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 CTU2Q2VPK5 515 aaKnown RBP13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 C6orf136Q5SQH8 315 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 DLEU7Q6UYE1 221 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 AGMOQ6ZNB7 445 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 RTN4RL1Q86UN2 441 aaPredicted RBP13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 CDYL2Q8N8U2 506 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 TTC16Q8NEE8 873 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 OR4L1Q8NH43 312 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 ITFG1Q8TB96 612 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 TSPEARQ8WU66 669 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 FUBP1Q96AE4 644 aaKnown RBP13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 ISG20Q96AZ6 181 aaKnown RBP13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 CYP2S1Q96SQ9 504 aa13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 GPN2Q9H9Y4 310 aaPredicted RBP13.95□□□□□ -0.18
CLCNKA-202ENST00000375692 PQBP1O60828 265 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 DEAF1O75398 565 aaPredicted RBP13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 OR4F21O95013 312 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 ENO2P09104 434 aaPredicted RBP13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 OR4Q2P0C623 313 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 HTR1BP28222 390 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 CDKN1CP49918 316 aaPredicted RBP13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 KCNC4Q03721 635 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 SPIDRQ14159 915 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 CBX2Q14781 532 aaPredicted RBP13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 NKG7Q16617 165 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 XKR7Q5GH72 579 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 PERM1Q5SV97 790 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 CRTC3Q6UUV7 619 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 UMODL1-AS1Q8N2C9 162 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 FBXO30Q8TB52 745 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 FKBP10Q96AY3 582 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 NRBF2Q96F24 287 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 SMIM14Q96QK8 99 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 ACBD6Q9BR61 282 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 TDRD1Q9BXT4 1180 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 BRINP2Q9C0B6 783 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 AMBRA1Q9C0C7 1298 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 FAM118AQ9NWS6 357 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms