RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 DYRK3O43781 588 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 NOBOXO60393 691 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 ASLP04424 464 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 PRPS2P11908 318 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 BMP7P18075 431 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 S100A1P23297 94 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 PTGER3P43115 390 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 GPR1P46091 355 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 OLIG2Q13516 323 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 GNA13Q14344 377 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 PAQR3Q6TCH7 311 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 LINGO4Q6UY18 593 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 ZNF438Q7Z4V0 828 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 TTC29Q8NA56 475 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-203ENST00000375274 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 SLITRK2Q9H156 845 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 DIABLOQ9NR28 239 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 GIN1Q9NXP7 522 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 TRIM17Q9Y577 477 aa11.42□□□□□ -0.58
PTCH1-203ENST00000375274 IQCF5A8MTL0 148 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 USP2O75604 605 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 MAPKAPK2P49137 400 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 GPAT3Q53EU6 434 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 DDI2Q5TDH0 399 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 ASRGL1Q7L266 308 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 RD3Q7Z3Z2 195 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 CIR1Q86X95 450 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 HID1Q8IV36 788 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 LIX1Q8N485 282 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 SCAMP5Q8TAC9 235 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 PPP1R14BQ96C90 147 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 SGK2Q9HBY8 427 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 INTS10Q9NVR2 710 aaKnown RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 CMTM6Q9NX76 183 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 EVLQ9UI08 416 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 PPEF2O14830 753 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 HLA-DQB2P05538 268 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 LINGO3P0C6S8 592 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 YAP1P46937 504 aaKnown RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 HCAR3P49019 387 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 MANFP55145 182 aaKnown RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 BNIP3Q12983 259 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 RAET1GQ6H3X3 334 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 FAM131AQ6UXB0 335 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 OR52J3Q8NH60 311 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 MIPEPQ99797 713 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 PREBQ9HCU5 417 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 C1orf109Q9NX04 203 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 ASF1AQ9Y294 204 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 TRAV19A0A0A6YYK7 116 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 hCG_2039718K7EN88 272 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 ADAMDEC1O15204 470 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 ACSL4O60488 711 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 PRG2P13727 222 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 CORO1AP31146 461 aaKnown RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 BUD31P41223 144 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 GSK3BP49841 420 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 SMARCB1Q12824 385 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 OR13C4Q8NGS5 318 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 TAMM41Q96BW9 452 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 AASDHPPTQ9NRN7 309 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 A0A1B0GVM2 712 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 FAM240BA0A1B0GVZ2 78 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 TCAF2A6NFQ2 919 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 FAM189A1O60320 539 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 UGT1A6P19224 532 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 UGT1A1P22309 533 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 UGT1A4P22310 534 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 UGT1A3P35503 534 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 UGT1A5P35504 534 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 STAT5AP42229 794 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 RPS14P62263 151 aaKnown RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 INCA1Q0VD86 236 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 NDUFA5Q16718 116 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 ZFP69Q49AA0 526 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 FNDC3BQ53EP0 1204 aaKnown RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 C16orf62Q7Z3J2 963 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 FAM20CQ8IXL6 584 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 PLD6Q8N2A8 252 aaKnown RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 LRRC17Q8N6Y2 441 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 SIDT2Q8NBJ9 832 aaKnown RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 TEX47Q8TBZ9 253 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 HERPUD2Q9BSE4 406 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 TTPALQ9BTX7 342 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 YTHDF1Q9BYJ9 559 aaKnown RBP11.41□□□□□ -0.58
PTCH1-203ENST00000375274 USP29Q9HBJ7 922 aa11.41□□□□□ -0.58
PTCH1-203ENST00000375274 CHD2O14647 1828 aaKnown RBP11.4□□□□□ -0.58
PTCH1-203ENST00000375274 AP3D1O14617 1153 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 CASKO14936 926 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 SPAM1P38567 509 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 NAE1Q13564 534 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 PAFAH1B3Q15102 231 aaKnown RBP11.4□□□□□ -0.58
PTCH1-203ENST00000375274 FAM110CQ1W6H9 321 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 GPR65Q8IYL9 337 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 TMEM209Q96SK2 561 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 ACTR3BQ9P1U1 418 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 ARL5CA6NH57 179 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 ALDOAP04075 364 aaKnown RBP11.4□□□□□ -0.58
PTCH1-203ENST00000375274 ANXA4P09525 319 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-203ENST00000375274 PRKAR1AP10644 381 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms