RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 HID1Q8IV36 788 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 SYNPOQ8N3V7 929 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 ZFPM2Q8WW38 1151 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 POLR2J2Q9GZM3 115 aaKnown RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 OR10A4Q9H209 315 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 SPON1Q9HCB6 807 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 SLC38A7Q9NVC3 462 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 PCDHA10Q9Y5I2 948 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 CPSF4O95639 269 aaKnown RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 CHRNA1P02708 482 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 ATP6AP1Q15904 470 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 BPHLQ86WA6 291 aaPredicted RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 ZNF248Q8NDW4 579 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 SPATA20Q8TB22 786 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 PPP1R13LQ8WUF5 828 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 NECAB3Q96P71 396 aaPredicted RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 RAVER2Q9HCJ3 691 aaKnown RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 NIT2Q9NQR4 276 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 ARHGEF4Q9NR80 690 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 LYRM2Q9NU23 88 aaPredicted RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 NUBP2Q9Y5Y2 271 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 EIF4G1Q04637 1599 aaKnown RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 HNRNPDQ14103 355 aaKnown RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 METTL11BQ5VVY1 283 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 SERPINA13PQ6UXR4 307 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 CD163Q86VB7 1156 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 PCSK9Q8NBP7 692 aaKnown RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 OR1J4Q8NGS1 313 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 TESCQ96BS2 214 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 DUSP16Q9BY84 665 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 KCTD10Q9H3F6 313 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 NTN4Q9HB63 628 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 CPQQ9Y646 472 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 WDR27A2RRH5 827 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 ARL6IP5O75915 188 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 PRKCGP05129 697 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 POLR2JP52435 117 aaKnown RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 MEDAGQ5VYS4 303 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 ARHGAP11AQ6P4F7 1023 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 PRSS55Q6UWB4 352 aaPredicted RBP6.56□□□□□ -1.36
UBR4-204ENST00000375254 NACC2Q96BF6 587 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 JCADQ9P266 1359 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 KDM5DQ9BY66 1539 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 TCRBV9S1A1TA0A576 114 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 DPP6P42658 865 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 RANP62826 216 aaKnown RBP6.55□□□□□ -1.36
UBR4-204ENST00000375254 CHAF1BQ13112 559 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 MOGSQ13724 837 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 NDUFA9Q16795 377 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 CPXCR1Q8N123 301 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 ELMO3Q96BJ8 720 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 AP1M2Q9Y6Q5 423 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 NAP1L6A6NFF2 107 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 FECHP22830 423 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 RYKP34925 604 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 CAMK2GQ13555 558 aaPredicted RBP6.55□□□□□ -1.36
UBR4-204ENST00000375254 DSC3Q14574 896 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 SCML4Q8N228 414 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 CHFRQ96EP1 664 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 C17orf62Q9BQA9 187 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 NAALAD2Q9Y3Q0 740 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 HRH3Q9Y5N1 445 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 BOLA2-SMG1P6H3BVE0 249 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 LIASO43766 372 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 ACSL4O60488 711 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 EGFRP00533 1210 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 FABP3P05413 133 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 CSF1RP07333 972 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 CRATP43155 626 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 NR0B1P51843 470 aaKnown RBP6.55□□□□□ -1.36
UBR4-204ENST00000375254 CXCR4P61073 352 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 ZNF169Q14929 603 aaPredicted RBP6.55□□□□□ -1.36
UBR4-204ENST00000375254 SPATA22Q8NHS9 363 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 GSX2Q9BZM3 304 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 PIF1Q9H611 641 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 TLR8Q9NR97 1041 aaKnown RBP6.55□□□□□ -1.36
UBR4-204ENST00000375254 CD300AQ9UGN4 299 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 VWA7Q9Y334 891 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 WASF2Q9Y6W5 498 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 TPP1O14773 563 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 MCCD1P59942 119 aaPredicted RBP6.55□□□□□ -1.36
UBR4-204ENST00000375254 SLC10A7Q0GE19 358 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 NFATC3Q12968 1075 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 C14orf28Q4W4Y0 310 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 OGFRL1Q5TC84 451 aaPredicted RBP6.55□□□□□ -1.36
UBR4-204ENST00000375254 RAD9AQ99638 391 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 SAE1Q9UBE0 346 aaPredicted RBP6.55□□□□□ -1.36
UBR4-204ENST00000375254 VPS28Q9UK41 221 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 RPTORQ8N122 1335 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 TOR1BO14657 336 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 NPHS1O60500 1241 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 DGKAP23743 735 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 CYP20A1Q6UW02 462 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 OR2L2Q8NH16 312 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 C10orf82Q8WW14 230 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 FEM1BQ9UK73 627 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 AKT3Q9Y243 479 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 WIZO95785 1651 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 CAP1Q01518 475 aa6.55□□□□□ -1.36
UBR4-204ENST00000375254 PRKCDQ05655 676 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms