RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 A0A0U1RQV5 110 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 CBX4O00257 560 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 PRRG1O14668 218 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 ARHGEF9O43307 516 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 NME6O75414 186 aaPredicted RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 SNAP29O95721 258 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 STSP08842 583 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 CD3GP09693 182 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 DDX6P26196 483 aaKnown RBP eCLIP8.93□□□□□ -0.98
UBR4-201ENST00000375218 FASLGP48023 281 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 EPHB3P54753 998 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 MAT1AQ00266 395 aaKnown RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 SSX2Q16385 188 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 PITRM1Q5JRX3 1037 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 ERASQ7Z444 233 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 LPGAT1Q92604 370 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 PROX1Q92786 737 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 FERMT1Q9BQL6 677 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 RNPEPQ9H4A4 650 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 AGO3Q9H9G7 860 aaKnown RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 C20orf96Q9NUD7 363 aaPredicted RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 FAM53CQ9NYF3 392 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 MGAT4CQ9UBM8 478 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 FADS2P1A8MWK0 482 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 ZBTB7AO95365 584 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 KRT6AP02538 564 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 KRT6BP04259 564 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 GSTP1P09211 210 aaKnown RBP8.92□□□□□ -0.98
UBR4-201ENST00000375218 MCF2P10911 925 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 NR2C1P13056 603 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 SLC8A1P32418 973 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 PBX3P40426 434 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 BTDP43251 543 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 CDK8P49336 464 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 CAPZA1P52907 286 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 KRT76Q01546 638 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 MARCH8Q5T0T0 291 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 UBXN11Q5T124 520 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 PAOXQ6QHF9 649 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 TAS1R1Q7RTX1 841 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 ZDHHC14Q8IZN3 488 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 OR5T1Q8NG75 326 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 C1orf43Q9BWL3 253 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 ZNF416Q9BWM5 594 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 WDR55Q9H6Y2 383 aaPredicted RBP8.92□□□□□ -0.98
UBR4-201ENST00000375218 PTTG3PQ9NZH4 202 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 WBP11Q9Y2W2 641 aaKnown RBP8.92□□□□□ -0.98
UBR4-201ENST00000375218 GPSM3Q9Y4H4 160 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 MAU2Q9Y6X3 613 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 ZNF213O14771 459 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 GNB5O14775 395 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 JRKO75564 520 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 DGKAP23743 735 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 RTN1Q16799 776 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 ARMC12Q5T9G4 340 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 ZNF468Q5VIY5 522 aaPredicted RBP8.92□□□□□ -0.98
UBR4-201ENST00000375218 C11orf57Q6ZUT1 292 aaPredicted RBP8.92□□□□□ -0.98
UBR4-201ENST00000375218 POMGNT2Q8NAT1 580 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 RBAKQ9NYW8 714 aaPredicted RBP8.92□□□□□ -0.98
UBR4-201ENST00000375218 METTL12A8MUP2 240 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 MATN3O15232 486 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 GPC4O75487 556 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 TFRCP02786 760 aaKnown RBP8.92□□□□□ -0.98
UBR4-201ENST00000375218 CASP1P29466 404 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 SLFN12LQ6IEE8 588 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 FBXO42Q6P3S6 717 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 TTC33Q6PID6 262 aaPredicted RBP8.92□□□□□ -0.98
UBR4-201ENST00000375218 SYT13Q7L8C5 426 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 RD3Q7Z3Z2 195 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 ADSSL1Q8N142 457 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 GLIS3Q8NEA6 775 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 RMND5BQ96G75 393 aaPredicted RBP8.92□□□□□ -0.98
UBR4-201ENST00000375218 PIWIL1Q96J94 861 aaKnown RBP8.92□□□□□ -0.98
UBR4-201ENST00000375218 WDR11Q9BZH6 1224 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.92□□□□□ -0.98
UBR4-201ENST00000375218 CCL27Q9Y4X3 112 aa8.92□□□□□ -0.98
UBR4-201ENST00000375218 MCM3APO60318 1980 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 H0Y858 1186 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 INPPL1O15357 1258 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 COCHO43405 550 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 DCXO43602 365 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 LYPLA2O95372 231 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 CD63P08962 238 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 HMGCLP35914 325 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 NDUFA8P51970 172 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 FMO1Q01740 532 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 HNRNPA1L2Q32P51 320 aaKnown RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 C3orf36Q3SXR2 165 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 LYPD8Q6UX82 237 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 RNF207Q6ZRF8 634 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 ZC3H7AQ8IWR0 971 aaKnown RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 ADGRF4Q8IZF3 695 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 KAT5Q92993 513 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 C5orf30Q96GV9 206 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 POTEKPQ9BYX7 375 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.91□□□□□ -0.98
UBR4-201ENST00000375218 COL2A1P02458 1487 aaPredicted RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 ABCD4O14678 606 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 HGSO14964 777 aaPredicted RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 FTLP02792 175 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms