RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 FAM213AQ9BRX8 229 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 MECRQ9BV79 373 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 TMEM120AQ9BXJ8 343 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 RBM38Q9H0Z9 239 aaKnown RBP4.61□□□□□ -1.67
PMS1-202ENST00000374826 TASP1Q9H6P5 420 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 TMEM206Q9H813 350 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 RPF1Q9H9Y2 349 aaKnown RBP4.61□□□□□ -1.67
PMS1-202ENST00000374826 UBN1Q9NPG3 1134 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 AGPAT3Q9NRZ7 376 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 MARCH5Q9NX47 278 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 SPG21Q9NZD8 308 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 MDFICQ9P1T7 246 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 TUBGCP4Q9UGJ1 667 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 HOOK1Q9UJC3 728 aaKnown RBP4.61□□□□□ -1.67
PMS1-202ENST00000374826 MAN1B1Q9UKM7 699 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 MAGED2Q9UNF1 606 aaPredicted RBP4.61□□□□□ -1.67
PMS1-202ENST00000374826 COPG1Q9Y678 874 aaKnown RBP4.61□□□□□ -1.67
PMS1-202ENST00000374826 MTCH2Q9Y6C9 303 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 STYXL1Q9Y6J8 313 aa4.61□□□□□ -1.67
PMS1-202ENST00000374826 KIAA1549LQ6ZVL6 1849 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 SMIM28A0A1B0GU29 152 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 TTC26A0AVF1 554 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 TRIM49BA6NDI0 452 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 SLC38A8A6NNN8 435 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 I3L4J1 428 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 MDM4O15151 490 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 TGFB1I1O43294 461 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 MSI1O43347 362 aaKnown RBP4.6□□□□□ -1.67
PMS1-202ENST00000374826 NEURL1O76050 574 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 SMC2O95347 1197 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 IFNA2P01563 188 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 NR3C1P04150 777 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 RB1P06400 928 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 CLCNKBP51801 687 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 CAMK1Q14012 370 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 SPARCL1Q14515 664 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 TMEM132DQ14C87 1099 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 KNOP1Q1ED39 458 aaKnown RBP4.6□□□□□ -1.67
PMS1-202ENST00000374826 TCEAL5Q5H9L2 206 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 ZNF658Q5TYW1 1059 aaPredicted RBP4.6□□□□□ -1.67
PMS1-202ENST00000374826 FUT10Q6P4F1 479 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 ALKAL1Q6UXT8 129 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 ADGRD2Q7Z7M1 963 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 CBWD2Q8IUF1 395 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 BRSK2Q8IWQ3 736 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 EFCAB13Q8IY85 973 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 GPD1LQ8N335 351 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 SPPL3Q8TCT6 385 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 GPT2Q8TD30 523 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 HMGB4Q8WW32 186 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 RSPH1Q8WYR4 309 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 MRPL38Q96DV4 380 aaKnown RBP4.6□□□□□ -1.67
PMS1-202ENST00000374826 IGSF21Q96ID5 467 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 TMEM175Q9BSA9 504 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 TMEM204Q9BSN7 226 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 ZBP1Q9H171 429 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 CLSTN2Q9H4D0 955 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 IL21RQ9HBE5 538 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 PDE11AQ9HCR9 933 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 ENTPD7Q9NQZ7 604 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 RMND1Q9NWS8 449 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 RBAKQ9NYW8 714 aaPredicted RBP4.6□□□□□ -1.67
PMS1-202ENST00000374826 CPSF3Q9UKF6 684 aaKnown RBP4.6□□□□□ -1.67
PMS1-202ENST00000374826 CNTN6Q9UQ52 1028 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 PTPRJQ12913 1337 aa4.6□□□□□ -1.67
PMS1-202ENST00000374826 NYNRINQ9P2P1 1898 aaKnown RBP4.6□□□□□ -1.67
PMS1-202ENST00000374826 FAM90A18PA6NE21 464 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 FAM90A16PA6NEW6 464 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 FAM90A9PA6NNJ1 464 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 HIDE1A8MVS5 230 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 FAM90A5PA8MXJ8 464 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 KCNJ18B7U540 433 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 MCIDASD6RGH6 385 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 PER2O15055 1255 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 LINC01565O15544 149 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 FFAR2O15552 330 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 EXTL3O43909 919 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 B3GAT3O94766 335 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 TNFRSF6BO95407 300 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 URODP06132 367 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 FAM90A15PP0C7V4 464 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 FAM90A14PP0C7W9 464 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 DLATP10515 647 aaKnown RBP4.59□□□□□ -1.67
PMS1-202ENST00000374826 KCNE1P15382 129 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 PRCPP42785 496 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 BRCC3P46736 316 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 NRIP1P48552 1158 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 CASP4P49662 377 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 ADPRHP54922 357 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 TFAMQ00059 246 aaKnown RBP4.59□□□□□ -1.67
PMS1-202ENST00000374826 UBE3AQ05086 875 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 CYP24A1Q07973 514 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 PMPCAQ10713 525 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 MORC3Q14149 939 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 SNRNP35Q16560 246 aaKnown RBP4.59□□□□□ -1.67
PMS1-202ENST00000374826 KYAT1Q16773 422 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 UPP1Q16831 310 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 XKR4Q5GH76 650 aa4.59□□□□□ -1.67
PMS1-202ENST00000374826 ARL13AQ5H913 290 aaPredicted RBP4.59□□□□□ -1.67
PMS1-202ENST00000374826 KLHL10Q6JEL2 608 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms