RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CYP2S1Q96SQ9 504 aa14.19□□□□□ -0.14
TRAF1-201ENST00000373887 ACE2Q9BYF1 805 aaPredicted RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 HBS1LQ9Y450 684 aaKnown RBP14.19□□□□□ -0.14
TRAF1-201ENST00000373887 IFT172Q9UG01 1749 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ADGRB2O60241 1585 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ZNF208O43345 1280 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 HCN1O60741 890 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ARL3P36405 182 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 SSR2P43308 183 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 LILRA4P59901 499 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 TIGD2Q4W5G0 525 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 TMPRSS11BQ86T26 416 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 SCAMP5Q8TAC9 235 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 HMCESQ96FZ2 354 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 TMEM51Q9NW97 253 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 SNX7Q9UNH6 387 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 MAP4K5Q9Y4K4 846 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 PCDHGC4Q9Y5F7 938 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 TRBC1P01850 177 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 IDO1P14902 403 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 MAZP56270 477 aaKnown RBP14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ACTR3P61158 418 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ATXN7L2Q5T6C5 722 aaPredicted RBP14.18□□□□□ -0.14
TRAF1-201ENST00000373887 PLET1Q6UQ28 207 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ABCB8Q9NUT2 735 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 SRRDQ9UH36 339 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ZNF490Q9ULM2 529 aaPredicted RBP14.18□□□□□ -0.14
TRAF1-201ENST00000373887 A0A0J9YYE9 177 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 HSD3B2P26439 372 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 BEND5Q7L4P6 421 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 TMEM192Q8IY95 271 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 PRSS58Q8IYP2 241 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 TXNRD2Q9NNW7 524 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 DKK3Q9UBP4 350 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 NRP1O14786 923 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 UGT2B11O75310 529 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 GCATO75600 419 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 PRKCGP05129 697 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 DGKGP49619 791 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ADAM17P78536 824 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 MEA1Q16626 185 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 CPTPQ5TA50 214 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 TXNDC11Q6PKC3 985 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 RAB43Q86YS6 212 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 SPERTQ8NA61 448 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 NAT14Q8WUY8 206 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ELAC1Q9H777 363 aaKnown RBP14.18□□□□□ -0.14
TRAF1-201ENST00000373887 PLEKHA1Q9HB21 404 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 C3orf14Q9HBI5 128 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 CCNB1IP1Q9NPC3 277 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ALOX5P09917 674 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ATF4P18848 351 aaPredicted RBP14.18□□□□□ -0.14
TRAF1-201ENST00000373887 C4orf46Q504U0 113 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 UBR7Q8N806 425 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 C4orf32Q8N8J7 132 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 DQX1Q8TE96 717 aaKnown RBP14.18□□□□□ -0.14
TRAF1-201ENST00000373887 SNX33Q8WV41 574 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 TSSK3Q96PN8 268 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 PHPT1Q9NRX4 125 aaPredicted RBP14.18□□□□□ -0.14
TRAF1-201ENST00000373887 GABRQQ9UN88 632 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 BCL9LQ86UU0 1499 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 ROBO1Q9Y6N7 1651 aa14.18□□□□□ -0.14
TRAF1-201ENST00000373887 GATMP50440 423 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 DGKEP52429 567 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 ACAP2Q15057 778 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 CHST15Q7LFX5 561 aaPredicted RBP14.17□□□□□ -0.14
TRAF1-201ENST00000373887 METTL3Q86U44 580 aaKnown RBP14.17□□□□□ -0.14
TRAF1-201ENST00000373887 CLEC4CQ8WTT0 213 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 TTYH1Q9H313 450 aaPredicted RBP14.17□□□□□ -0.14
TRAF1-201ENST00000373887 SEC14L3Q9UDX4 400 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 ZNF180Q9UJW8 692 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 TPST2O60704 377 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 AP2S1P53680 142 aaPredicted RBP14.17□□□□□ -0.14
TRAF1-201ENST00000373887 FOXM1Q08050 763 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 FUT2Q10981 343 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 ZNF398Q8TD17 642 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 AP2M1Q96CW1 435 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 UNC93B1Q9H1C4 597 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 C11orf16Q9NQ32 467 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 SORCS3Q9UPU3 1222 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 ATRNO75882 1429 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 TEX46H3BTG2 121 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 TBX18O95935 607 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 NT5EP21589 574 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 IGFBP5P24593 272 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 GDI1P31150 447 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 HID1Q8IV36 788 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 ADAMTS15Q8TE58 950 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 BORCS5Q969J3 196 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 DMRTB1Q96MA1 342 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 DNAJC11Q9NVH1 559 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 ITGB1BP2Q9UKP3 347 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 PRAMEF33A0A0G2JMD5 474 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 FPGTO14772 594 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 BCKDKO14874 412 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 PRAMEF10O60809 474 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 CXCR3P49682 368 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 CMC1Q7Z7K0 106 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 ADAMTSL2Q86TH1 951 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 TAC4Q86UU9 113 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms