RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 FAM234BA2RU67 622 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 OR51F1A6NGY5 319 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 UBXN8O00124 270 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 ARNTLO00327 626 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 E2F3O00716 465 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 NEMP1O14524 444 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 MRASO14807 208 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 NPC1O15118 1278 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 FFAR2O15552 330 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 HOXC11O43248 304 aaPredicted RBP8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 HNRNPRO43390 633 aaKnown RBP8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 NUAK1O60285 661 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 SNAP91O60641 907 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 KRT36O76013 467 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 ADH1CP00326 375 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 GPIP06744 558 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 C8BP07358 591 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 PIM1P11309 404 aaPredicted RBP8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 GPX3P22352 226 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 CPA2P48052 419 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 EEFSECP57772 596 aaKnown RBP8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 C1QTNF8P60827 252 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 PRKG2Q13237 762 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 CAMK2BQ13554 666 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 RCAN2Q14206 197 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 ADRM1Q16186 407 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 LRRC26Q2I0M4 334 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 AGKQ53H12 422 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 SETMARQ53H47 684 aaPredicted RBP8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 CTSL3PQ5NE16 218 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 LDLRAP1Q5SW96 308 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 PSAPL1Q6NUJ1 521 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 ERAP2Q6P179 960 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 BLOC1S3Q6QNY0 202 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 GDPD4Q6W3E5 623 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 MSANTD1Q6ZTZ1 278 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 ZNF765Q7L2R6 523 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 LRRC70Q7Z2Q7 622 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 LYSMD3Q7Z3D4 306 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 CYP2U1Q7Z449 544 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 TRIM46Q7Z4K8 759 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 PROSER1Q86XN7 944 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 CAMK1DQ8IU85 385 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 BBS7Q8IWZ6 715 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 PQLC1Q8N2U9 271 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 RYBPQ8N488 228 aaPredicted RBP8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 DPP10Q8N608 796 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 ICA1LQ8NDH6 482 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 SH3RF2Q8TEC5 729 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 DIS3LQ8TF46 1054 aaKnown RBP8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 EEF1AKMT1Q8WVE0 214 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 ASZ1Q8WWH4 475 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 TUBGCP3Q96CW5 907 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 RCN3Q96D15 328 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 SGF29Q96ES7 293 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 DCUN1D1Q96GG9 259 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 CATSPER2Q96P56 530 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 CDCA3Q99618 268 aaPredicted RBP8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 HEPHQ9BQS7 1158 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 SLC12A9Q9BXP2 914 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 ZCCHC2Q9C0B9 1178 aaKnown RBP8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 FAM192AQ9GZU8 254 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 AKTIPQ9H8T0 292 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 CYP4F12Q9HCS2 524 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 HEBP1Q9NRV9 189 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 ARMC1Q9NVT9 282 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 NMRK1Q9NWW6 199 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 EIF3LQ9Y262 564 aaKnown RBP8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 SLC4A7Q9Y6M7 1214 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 TET1Q8NFU7 2136 aa8.6□□□□□ -1.03
SNRNP40-202ENST00000373720 SCN5AQ14524 2016 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 A0A1W2PRU2 124 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 TRIM43BA6NCK2 446 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 NEMP2A6NFY4 417 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 H0Y3Z8 333 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 K7EPI3 171 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 UBFD1O14562 309 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ACOT8O14734 319 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PER2O15055 1255 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 TRIM24O15164 1050 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 CFLARO15519 480 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 DENRO43583 198 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 AP1G1O43747 822 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PRMT3O60678 531 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 EEDO75530 441 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ZNF821O75541 412 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 SLC22A3O75751 556 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 KRT6AP02538 564 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PRNPP04156 253 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 KRT6BP04259 564 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 IL6P05231 212 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 LINC00271P0C7V0 271 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 HSD3B1P14060 373 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 HGFP14210 728 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 EPB42P16452 691 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 BPIP17213 487 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 CYP2A7P20853 494 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 KCNA5P22460 613 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 JAK1P23458 1154 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PRPH2P23942 346 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms