RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 TBC1D3BA6NDS4 549 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 CLPTM1O96005 669 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 MSH3P20585 1137 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 MTTPP55157 894 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 FAM189BP81408 668 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 SF1Q15637 639 aaKnown RBP13.03□□□□□ -0.32
NCDN-203ENST00000373253 ARSIQ5FYB1 569 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 USP45Q70EL2 814 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 UBE2R2Q712K3 238 aaPredicted RBP13.03□□□□□ -0.32
NCDN-203ENST00000373253 GAREM2Q75VX8 874 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 BNIPLQ7Z465 357 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 OR4F6Q8NGB9 312 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 PLD4Q96BZ4 506 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 TSEN34Q9BSV6 310 aaKnown RBP13.03□□□□□ -0.32
NCDN-203ENST00000373253 ALG2Q9H553 416 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 DYRK4Q9NR20 520 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 KIAA1522Q9P206 1035 aaPredicted RBP13.03□□□□□ -0.32
NCDN-203ENST00000373253 IKZF3Q9UKT9 509 aa13.03□□□□□ -0.32
NCDN-203ENST00000373253 CFAP20Q9Y6A4 193 aaKnown RBP13.03□□□□□ -0.32
NCDN-203ENST00000373253 HIDE1A8MVS5 230 aa13.02□□□□□ -0.32
NCDN-203ENST00000373253 ZNF195O14628 629 aa13.02□□□□□ -0.32
NCDN-203ENST00000373253 EPB42P16452 691 aa13.02□□□□□ -0.32
NCDN-203ENST00000373253 HMGA1P17096 107 aaKnown RBP13.02□□□□□ -0.32
NCDN-203ENST00000373253 PRKG2Q13237 762 aa13.02□□□□□ -0.32
NCDN-203ENST00000373253 IRF5Q13568 498 aa13.02□□□□□ -0.32
NCDN-203ENST00000373253 C11orf91Q3C1V1 193 aa13.02□□□□□ -0.32
NCDN-203ENST00000373253 PLEKHG6Q3KR16 790 aa13.02□□□□□ -0.32
NCDN-203ENST00000373253 CHST9Q7L1S5 443 aa13.02□□□□□ -0.32
NCDN-203ENST00000373253 RBFAQ8N0V3 343 aa13.02□□□□□ -0.32
NCDN-203ENST00000373253 EZH1Q92800 747 aaPredicted RBP13.02□□□□□ -0.32
NCDN-203ENST00000373253 ABTB1Q969K4 478 aaPredicted RBP13.02□□□□□ -0.32
NCDN-203ENST00000373253 SPASTQ9UBP0 616 aa13.02□□□□□ -0.32
NCDN-203ENST00000373253 CFAP99D6REC4 459 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 LEFTY2O00292 366 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 SAP18O00422 153 aaKnown RBP13.02□□□□□ -0.33
NCDN-203ENST00000373253 PCDH8O95206 1070 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 VNN2O95498 520 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 DGKAP23743 735 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 DPP6P42658 865 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 GTF2H2Q13888 395 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 TRIM25Q14258 630 aaKnown RBP13.02□□□□□ -0.33
NCDN-203ENST00000373253 PHKG1Q16816 387 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 ARHGAP15Q53QZ3 475 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 GTF2H2CQ6P1K8 395 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 SPRED2Q7Z698 418 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 WARS2Q9UGM6 360 aaKnown RBP13.02□□□□□ -0.33
NCDN-203ENST00000373253 RNF11Q9Y3C5 154 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 LRRC42Q9Y546 428 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 PRSS21Q9Y6M0 314 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 TRIOBPQ9H2D6 2365 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 C15orf38-AP3S2A0A0A6YYH1 394 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 LOC285095A0A1B0GVY8 99 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 RNASEH2AO75792 299 aaKnown RBP13.02□□□□□ -0.33
NCDN-203ENST00000373253 G6PDP11413 515 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 PREPP48147 710 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 ATP6V0D1P61421 351 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 CACNG1Q06432 222 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 LRRC74AQ0VAA2 488 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 KRT33BQ14525 404 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 ZNF284Q2VY69 593 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 FAM174BQ3ZCQ3 159 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 TMEM214Q6NUQ4 689 aaKnown RBP13.02□□□□□ -0.33
NCDN-203ENST00000373253 ZNF621Q6ZSS3 439 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 ARPINQ7Z6K5 226 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 FUBP1Q96AE4 644 aaKnown RBP13.02□□□□□ -0.33
NCDN-203ENST00000373253 NLE1Q9NVX2 485 aaPredicted RBP13.02□□□□□ -0.33
NCDN-203ENST00000373253 EIF3LQ9Y262 564 aaKnown RBP13.02□□□□□ -0.33
NCDN-203ENST00000373253 ITM2BQ9Y287 266 aa13.02□□□□□ -0.33
NCDN-203ENST00000373253 PFDN1O60925 122 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 OR6B1O95007 311 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 STATHP02808 62 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 LAG3P18627 525 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 VIPR2P41587 438 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 CDH15P55291 814 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 IRF8Q02556 426 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 FNDC3BQ53EP0 1204 aaKnown RBP13.01□□□□□ -0.33
NCDN-203ENST00000373253 FAM180BQ6P0A1 224 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 C11orf74Q86VG3 221 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 ENDOVQ8N8Q3 282 aaKnown RBP13.01□□□□□ -0.33
NCDN-203ENST00000373253 DCUN1D5Q9BTE7 237 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 CCDC28BQ9BUN5 200 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 INTS7Q9NVH2 962 aaKnown RBP13.01□□□□□ -0.33
NCDN-203ENST00000373253 NEU3Q9UQ49 428 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 DRGXA6NNA5 263 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 ALDOCP09972 364 aaKnown RBP13.01□□□□□ -0.33
NCDN-203ENST00000373253 PAX3P23760 479 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 SMARCB1Q12824 385 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 LAPTM4AQ15012 233 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 TTC33Q6PID6 262 aaPredicted RBP13.01□□□□□ -0.33
NCDN-203ENST00000373253 SERPINA13PQ6UXR4 307 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 RD3Q7Z3Z2 195 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 CBR4Q8N4T8 237 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 TMEM159Q96B96 161 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 CCDC138Q96M89 665 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 NSMCE2Q96MF7 247 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 NSMCE3Q96MG7 304 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 GNPTGQ9UJJ9 305 aa13.01□□□□□ -0.33
NCDN-203ENST00000373253 DHRS12A0PJE2 317 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms