RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 CNOT11Q9UKZ1 510 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 IGKV6D-21A0A0A0MT36 114 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ZNF99A8MXY4 864 aaPredicted RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 INPPL1O15357 1258 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 RHEBQ15382 184 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TEAD4Q15561 434 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 PSMD5Q16401 504 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 MGAT5BQ3V5L5 792 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 IGSF11Q5DX21 431 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHD6-203ENST00000373233 TRABD2AQ86V40 505 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 CHPFQ8IZ52 775 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 HEXDCQ8WVB3 486 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TPD52L3Q96J77 140 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 LPIN3Q9BQK8 851 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 FTHL17Q9BXU8 183 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ANKRA2Q9H9E1 313 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 RGS18Q9NS28 235 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 COG5Q9UP83 839 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 RLFQ13129 1914 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 PRSS44E7EML9 344 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 E9PAM4 449 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 F8VP50 259 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 AGPSO00116 658 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 CHP2O43745 196 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 UGT2B11O75310 529 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 SCGNO76038 276 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 CTNNB1P35222 781 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 CDKN2CP42773 168 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 C1orf94Q6P1W5 598 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 MAMDC4Q6UXC1 1216 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 CFAP206Q8IYR0 622 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 COQ8AQ8NI60 647 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 ING5Q8WYH8 240 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 STRA6Q9BX79 667 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 PSMD3O43242 534 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 DFNA5O60443 496 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 LYPLA1O75608 230 aaPredicted RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 ACO1P21399 889 aaKnown RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 PRDX6P30041 224 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 TIE1P35590 1138 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 CDH13P55290 713 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 SLC39A12Q504Y0 691 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 CCDC71Q8IV32 467 aaPredicted RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 TRIM43Q96BQ3 446 aaPredicted RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 SLC47A1Q96FL8 570 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 C7orf26Q96N11 449 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 C7orf50Q9BRJ6 194 aaKnown RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 FAM124BQ9H5Z6 455 aaPredicted RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 SMIM28A0A1B0GU29 152 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 A0A1W2PPW3 197 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 ANKRD34BA5PLL1 514 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 RPLP0P05388 317 aaKnown RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 RBP1P09455 135 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 MLNP12872 115 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 MZF1P28698 734 aaPredicted RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 LCN1P31025 176 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 MGAT5Q09328 741 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 ELP6Q0PNE2 266 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 PTCD3Q96EY7 689 aaKnown RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 NTN4Q9HB63 628 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 COPZ2Q9P299 210 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 PPIEQ9UNP9 301 aaKnown RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 CEP250Q9BV73 2442 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 C2orf71A6NGG8 1288 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 E9PI62 339 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 MTA2O94776 668 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 MPOP05164 745 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 HMBSP08397 361 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 CHI3L1P36222 383 aaPredicted RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 HNMTP50135 292 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 MCCD1P59942 119 aaPredicted RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 ELAVL2Q12926 359 aaKnown RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 ZNF235Q14590 738 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 PPP1R26Q5T8A7 1209 aaPredicted RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 DCDC5Q6ZRR9 648 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 C12orf29Q8N999 325 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 ANKRD52Q8NB46 1076 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 ACTL9Q8TC94 416 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 SLC9A6Q92581 669 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 FIZ1Q96SL8 496 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 PAK6Q9NQU5 681 aaPredicted RBP6.52□□□□□ -1.37
CHD6-203ENST00000373233 LATS2Q9NRM7 1088 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 PCDHGB3Q9Y5G1 929 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 ST14Q9Y5Y6 855 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 SLC30A1Q9Y6M5 507 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 DNAJC25-GNG10A0A024R161 153 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 ITM2AO43736 263 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 ELK3P41970 407 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 TAS2R40P59535 323 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 PCID2Q5JVF3 399 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 CADM2Q8N3J6 435 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 MS4A4AQ96JQ5 239 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 NODALQ96S42 347 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 BEX2Q9BXY8 128 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 UCK2Q9BZX2 261 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 AAASQ9NRG9 546 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 AP3M1Q9Y2T2 418 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 ANK1P16157 1881 aa6.52□□□□□ -1.37
CHD6-203ENST00000373233 INHAP05111 366 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms