RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 CNSTQ6PJW8 725 aa16.07■□□□□ 0.16
TMEM53-203ENST00000372242 UHMK1Q8TAS1 419 aaKnown RBP16.07■□□□□ 0.16
TMEM53-203ENST00000372242 FAM122AQ96E09 287 aa16.07■□□□□ 0.16
TMEM53-203ENST00000372242 BIRC8Q96P09 236 aa16.07■□□□□ 0.16
TMEM53-203ENST00000372242 OSGEPL1Q9H4B0 414 aa16.07■□□□□ 0.16
TMEM53-203ENST00000372242 INTS10Q9NVR2 710 aaKnown RBP16.07■□□□□ 0.16
TMEM53-203ENST00000372242 PIKFYVEQ9Y2I7 2098 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 PFDN6O15212 129 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 AP2A2O94973 939 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 C1QAP02745 245 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 AHSGP02765 367 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 GIMD1P0DJR0 217 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 CD59P13987 128 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 ITGB6P18564 788 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 PMS2P54278 862 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 LRP8Q14114 963 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 EFTUD2Q15029 972 aaKnown RBP eCLIP16.06■□□□□ 0.16
TMEM53-203ENST00000372242 KBTBD12Q3ZCT8 623 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 CTSL3PQ5NE16 218 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 AMZ2Q86W34 360 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 KRT222Q8N1A0 295 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 FSTL5Q8N475 847 aaPredicted RBP16.06■□□□□ 0.16
TMEM53-203ENST00000372242 MYRIPQ8NFW9 859 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 GABPB2Q8TAK5 448 aaPredicted RBP16.06■□□□□ 0.16
TMEM53-203ENST00000372242 GSDMCQ9BYG8 508 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 TXLNGYQ9BZA5 131 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 SPATS2LQ9NUQ6 558 aaKnown RBP16.06■□□□□ 0.16
TMEM53-203ENST00000372242 GULP1Q9UBP9 304 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 DOLKQ9UPQ8 538 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 BTBD3Q9Y2F9 522 aa16.06■□□□□ 0.16
TMEM53-203ENST00000372242 PTPRZ1P23471 2315 aaPredicted RBP16.06■□□□□ 0.16
TMEM53-203ENST00000372242 LMO7DNF2Z398 122 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 SPAG6O75602 509 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 OR56A5P0C7T3 313 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 STX2P32856 288 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 LEPRP48357 1165 aaKnown RBP16.05■□□□□ 0.16
TMEM53-203ENST00000372242 NFE2L1Q14494 772 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 PTRHD1Q6GMV3 140 aaKnown RBP16.05■□□□□ 0.16
TMEM53-203ENST00000372242 ZNF549Q6P9A3 640 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 NAPRTQ6XQN6 538 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 FAM83HQ6ZRV2 1179 aaPredicted RBP16.05■□□□□ 0.16
TMEM53-203ENST00000372242 CYS1Q717R9 158 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 ALYREFQ86V81 257 aaKnown RBP16.05■□□□□ 0.16
TMEM53-203ENST00000372242 GKN2Q86XP6 184 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 SFTPA2Q8IWL1 248 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 CTAGE3PQ8IX95 158 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 LILRA3Q8N6C8 439 aaPredicted RBP16.05■□□□□ 0.16
TMEM53-203ENST00000372242 EID2Q8N6I1 236 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 FAM46DQ8NEK8 389 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 LKAAEAR1Q8TD35 194 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 FAM136AQ96C01 138 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 TIMM29Q9BSF4 260 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 TAAR2Q9P1P5 351 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 VPS9D1Q9Y2B5 631 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 CSNK1G3Q9Y6M4 447 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 CFAP54Q96N23 3096 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 ASCC3Q8N3C0 2202 aaKnown RBP16.05■□□□□ 0.16
TMEM53-203ENST00000372242 NEMP2A6NFY4 417 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 FAM159BA6NKW6 160 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 TRIM38O00635 465 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 SNX2O60749 519 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 TRIM16O95361 564 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 ANXA6P08133 673 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 PLA2G5P39877 138 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 ARHGAP8P85298 464 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 BRD3Q15059 726 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 KIAA0408Q6ZU52 694 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 STRA8Q7Z7C7 330 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.05■□□□□ 0.16
TMEM53-203ENST00000372242 ATXN7L3BQ96GX2 97 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 CCM2Q9BSQ5 444 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 DPEP2Q9H4A9 486 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 TBC1D29Q9UFV1 150 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 RABGEF1Q9UJ41 708 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 GNPTGQ9UJJ9 305 aa16.05■□□□□ 0.16
TMEM53-203ENST00000372242 ZFC3H1O60293 1989 aaKnown RBP16.05■□□□□ 0.16
TMEM53-203ENST00000372242 MGAT4DA6NG13 374 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 NIPSNAP2O75323 286 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 EML2O95834 649 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 RPS3P23396 243 aaKnown RBP eCLIP16.04■□□□□ 0.16
TMEM53-203ENST00000372242 RPL10P27635 214 aaKnown RBP16.04■□□□□ 0.16
TMEM53-203ENST00000372242 PHBP35232 272 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 ADARP55265 1226 aaKnown RBP16.04■□□□□ 0.16
TMEM53-203ENST00000372242 SLC14A1Q13336 389 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 SUZ12Q15022 739 aaKnown RBP16.04■□□□□ 0.16
TMEM53-203ENST00000372242 SEPT7Q16181 437 aaKnown RBP16.04■□□□□ 0.16
TMEM53-203ENST00000372242 DBX2Q6ZNG2 339 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 LRRC6Q86X45 466 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 SPNS2Q8IVW8 549 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 CFAP206Q8IYR0 622 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 PPM1NQ8N819 430 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 OR2L2Q8NH16 312 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 SETD7Q8WTS6 366 aaKnown RBP16.04■□□□□ 0.16
TMEM53-203ENST00000372242 SCG3Q8WXD2 468 aaKnown RBP16.04■□□□□ 0.16
TMEM53-203ENST00000372242 CDKL2Q92772 493 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 MRRFQ96E11 262 aaKnown RBP16.04■□□□□ 0.16
TMEM53-203ENST00000372242 LINC00615Q96LM1 132 aaPredicted RBP16.04■□□□□ 0.16
TMEM53-203ENST00000372242 CAMK1GQ96NX5 476 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 NDNQ99608 321 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 PRDM8Q9NQV8 689 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms