RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 POGLUT1Q8NBL1 392 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 RHBDF1Q96CC6 855 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ERVK-19Q9WJR5 959 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 KCNE2Q9Y6J6 123 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 COL6A1P12109 1028 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ITPKBP27987 946 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 POLR2LP62875 67 aaKnown RBP15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 DCST2Q5T1A1 773 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 NEPROQ6NW34 567 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 RFWD3Q6PCD5 774 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 RIOX2Q8IUF8 465 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 DPF1Q92782 380 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 MAELQ96JY0 434 aaKnown RBP15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 TRAF6Q9Y4K3 522 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 SHROOM3Q8TF72 1996 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 KCNU1A8MYU2 1149 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 SLC37A4O43826 429 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 TSPAN15O95858 294 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ZNF598Q86UK7 904 aaKnown RBP15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ZNF705FA8MVS1 300 aaPredicted RBP15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 NME6O75414 186 aaPredicted RBP15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 CYP17A1P05093 508 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ZNF705DP0CH99 300 aaPredicted RBP15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ZNF705BP0CI00 300 aaPredicted RBP15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ALLCQ8N6M5 410 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 PIGXQ8TBF5 258 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ZNHIT2Q9UHR6 403 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 TSPAN16Q9UKR8 245 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 HSD17B2P37059 387 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 PIK3CBP42338 1070 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 NFE2L1Q14494 772 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 PTGR1Q14914 329 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ALG1LQ6GMV1 187 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 SPATA19Q7Z5L4 167 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 SNX29P2Q8IUI4 249 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 MCMBPQ9BTE3 642 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 GNB3P16520 340 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 RAB3BP20337 219 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 PEX6Q13608 980 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ASTE1Q2TB18 679 aaPredicted RBP15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 ANKDD1AQ495B1 522 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 GCNT6Q5T4J0 391 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 TMEM203Q969S6 136 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 C17orf75Q9HAS0 396 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 C19orf12Q9NSK7 152 aa15.16■□□□□ 0.02
GTF3C4-201ENST00000372146 EPCAMP16422 314 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 COL28A1Q2UY09 1125 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 NPNTQ6UXI9 565 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 SLC17A7Q9P2U7 560 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 CDK10Q15131 360 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 CPSF6Q16630 551 aaKnown RBP eCLIP15.15■□□□□ 0.021e-8■■■■■ 32.2
GTF3C4-201ENST00000372146 USP41Q3LFD5 358 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 ABRAQ8N0Z2 381 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 OR6K6Q8NGW6 343 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 BRINP2Q9C0B6 783 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 POLR2J2Q9GZM3 115 aaKnown RBP15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 CD93Q9NPY3 652 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 KCNH7Q9NS40 1196 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 RIMKLBQ9ULI2 386 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 CCNB2O95067 398 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 TBX4P57082 545 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 TAPT1Q6NXT6 567 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 ZNF529Q6P280 563 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 PSTKQ8IV42 348 aaKnown RBP15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 RBM12BQ8IXT5 1001 aaKnown RBP15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 PRRG4Q9BZD6 226 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 TLL2Q9Y6L7 1015 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 IGSF1Q8N6C5 1336 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 PPIL2Q13356 520 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 DNAJC28Q9NX36 388 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 NPIPA7E9PJI5 369 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 ERAL1O75616 437 aaKnown RBP15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 NPIPA8P0DM63 369 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 EVI2BP34910 448 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 PPATQ06203 517 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 ANKRD23Q86SG2 305 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 SCGB1C1Q8TD33 95 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 KLHL15Q96M94 604 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 GFOD1Q9NXC2 390 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 ZNF254O75437 659 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 MTHFD1P11586 935 aaKnown RBP15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 DCKP27707 260 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 PNLDC1Q8NA58 520 aaKnown RBP15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 DNAAF1Q8NEP3 725 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 MALSU1Q96EH3 234 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 KCTD15Q96SI1 283 aaPredicted RBP15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 ZDHHC6Q9H6R6 413 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 GPRC5CQ9NQ84 441 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 OAZ2O95190 189 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 IQCCQ4KMZ1 466 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 ZNF574Q6ZN55 896 aaPredicted RBP15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 BEND4Q6ZU67 534 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 LYARQ9NX58 379 aaKnown RBP15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 HCN3Q9P1Z3 774 aa15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 ZNF490Q9ULM2 529 aaPredicted RBP15.15■□□□□ 0.02
GTF3C4-201ENST00000372146 NPEPPSL1A6NEC2 478 aa15.14■□□□□ 0.01
GTF3C4-201ENST00000372146 ZNF878C9JN71 531 aa15.14■□□□□ 0.01
GTF3C4-201ENST00000372146 ACVR2AP27037 513 aa15.14■□□□□ 0.01
GTF3C4-201ENST00000372146 CAP2P40123 477 aa15.14■□□□□ 0.01
GTF3C4-201ENST00000372146 PTPN11Q06124 597 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms